16S rRNA gene sequencing and healthy reference ranges for 28 clinically relevant microbial taxa from the human gut microbiome

Dysbiosis in the intensive care unit: Microbiome science coming to the bedside

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Taking it Personally: Personalized Utilization of the Human Microbiome in Health and Disease

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Microbiome and chronic inflammatory bowel diseases

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Microbiome-wide association studies link dynamic microbial consortia to disease

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Comparison of Microbial Communities Isolated from Feces of Asymptomatic Salmonella-Shedding and Non-Salmonella Shedding Dairy Cows

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Current and Past Strategies for Bacterial Culture in Clinical Microbiology

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High-level adherence to a Mediterranean diet beneficially impacts the gut microbiota and associated metabolome

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Personalized medicine going precise: from genomics to microbiomics

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Meta-analyses of human gut microbes associated with obesity and IBD

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The Microbiome in Inflammatory Bowel Disease: Current Status and the Future Ahead

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Cultivation-based multiplex phenotyping of human gut microbiota allows targeted recovery of previously uncultured bacteria

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Swarm: robust and fast clustering method for amplicon-based studies

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Richness of human gut microbiome correlates with metabolic markers

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Dominant Fecal Microbiota in Newly Diagnosed Untreated Inflammatory Bowel Disease Patients

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The Human Microbiome: Our Second Genome

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Defining a Healthy Human Gut Microbiome: Current Concepts, Future Directions, and Clinical Applications

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Bacteria as vitamin suppliers to their host: a gut microbiota perspective

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Comparative meta-analysis of the effect of Lactobacillus species on weight gain in humans and animals

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(2012) George M. Weinstock   NATURE

Transforming clinical microbiology with bacterial genome sequencing

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The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

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Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment

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High-protein, reduced-carbohydrate weight-loss diets promote metabolite profiles likely to be detrimental to colonic health

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Dysbiosis of the faecal microbiota in patients with Crohn's disease and their unaffected relatives

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Obesity-associated gut microbiota is enriched in Lactobacillus reuteri and depleted in Bifidobacterium animalis and Methanobrevibacter smithii

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Mucolytic Bacteria With Increased Prevalence in IBD Mucosa Augment In Vitro Utilization of Mucin by Other Bacteria

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Mechanisms controlling pathogen colonization of the gut

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A Pyrosequencing Study in Twins Shows That Gastrointestinal Microbial Profiles Vary With Inflammatory Bowel Disease Phenotypes

(2010) Ben P. Willing et al.   GASTROENTEROLOGY

Dysbiosis of fecal microbiota in Crohnʼs disease patients as revealed by a custom phylogenetic microarray

(2010) Seungha Kang et al.   INFLAMMATORY BOWEL DISEASES

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The bifidogenic effect of inulin and oligofructose and its consequences for gut health

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Clostridium difficile—A continually evolving and problematic pathogen

(2009) Lisa F. Dawson et al.   INFECTION GENETICS AND EVOLUTION

Probiotics modulate the Bifidobacterium microbiota of elderly nursing home residents

(2008) Sampo J. Lahtinen et al.   AGE

Then and now: use of 16S rDNA gene sequencing for bacterial identification and discovery of novel bacteria in clinical microbiology laboratories

(2008) P.C.Y. Woo et al.   CLINICAL MICROBIOLOGY AND INFECTION

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE

Mechanisms of infectious diarrhea

(2008) Udayakumar Navaneethan et al.   Nature clinical practice. Gastroenterology & hepatology