Integrating Crop Growth Models with Whole Genome Prediction through Approximate Bayesian Computation
出版年份 2015 全文链接
标题
Integrating Crop Growth Models with Whole Genome Prediction through Approximate Bayesian Computation
作者
关键词
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出版物
PLoS One
Volume 10, Issue 6, Pages e0130855
出版商
Public Library of Science (PLoS)
发表日期
2015-06-30
DOI
10.1371/journal.pone.0130855
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Growing access to phenotype data
- (2015) NATURE GENETICS
- Remote, aerial phenotyping of maize traits with a mobile multi-sensor approach
- (2015) Frank Liebisch et al. Plant Methods
- Evaluation of Genomic Selection Training Population Designs and Genotyping Strategies in Plant Breeding Programs Using Simulation
- (2014) John M. Hickey et al. CROP SCIENCE
- APSIM – Evolution towards a new generation of agricultural systems simulation
- (2014) Dean P. Holzworth et al. ENVIRONMENTAL MODELLING & SOFTWARE
- Genomic prediction in biparental tropical maize populations in water-stressed and well-watered environments using low-density and GBS SNPs
- (2014) X Zhang et al. HEREDITY
- Breeding drought-tolerant maize hybrids for the US corn-belt: discovery to product
- (2014) Mark Cooper et al. JOURNAL OF EXPERIMENTAL BOTANY
- Nitrogen-use efficiency in maize (Zea mays L.): from 'omics' studies to metabolic modelling
- (2014) M. Simons et al. JOURNAL OF EXPERIMENTAL BOTANY
- Genomic evaluation of cattle in a multi-breed context
- (2014) Mogens Sandø Lund et al. Livestock Science
- A framework for parameter estimation and model selection from experimental data in systems biology using approximate Bayesian computation
- (2014) Juliane Liepe et al. Nature Protocols
- Transgenic alteration of ethylene biosynthesis increases grain yield in maize under field drought-stress conditions
- (2014) Jeffrey E. Habben et al. PLANT BIOTECHNOLOGY JOURNAL
- Approximate Bayesian Computation using Markov Chain Monte Carlo simulation: DREAM(ABC)
- (2014) Mojtaba Sadegh et al. WATER RESOURCES RESEARCH
- Predicting the future of plant breeding: complementing empirical evaluation with genetic prediction
- (2014) Mark Cooper et al. Crop & Pasture Science
- Parametric and Nonparametric Statistical Methods for Genomic Selection of Traits with Additive and Epistatic Genetic Architectures
- (2014) Réka Howard et al. G3-Genes Genomes Genetics
- Using systems modelling to explore the potential for root exudates to increase phosphorus use efficiency in cereal crops
- (2013) Enli Wang et al. ENVIRONMENTAL MODELLING & SOFTWARE
- Priors in Whole-Genome Regression: The Bayesian Alphabet Returns
- (2013) D. Gianola GENETICS
- Genomic BLUP Decoded: A Look into the Black Box of Genomic Prediction
- (2013) D. Habier et al. GENETICS
- Post-GWAS: where next? More samples, more SNPs or more biology?
- (2013) P Marjoram et al. HEREDITY
- Maize ARGOS1 (ZAR1) transgenic alleles increase hybrid maize yield
- (2013) M. Guo et al. JOURNAL OF EXPERIMENTAL BOTANY
- Genomic selection allowing for marker-by-environment interaction
- (2013) Torben Schulz-Streeck et al. PLANT BREEDING
- Genomic prediction of dichotomous traits with Bayesian logistic models
- (2013) Frank Technow et al. THEORETICAL AND APPLIED GENETICS
- A reaction norm model for genomic selection using high-dimensional genomic and environmental data
- (2013) Diego Jarquín et al. THEORETICAL AND APPLIED GENETICS
- Integrating environmental covariates and crop modeling into the genomic selection framework to predict genotype by environment interactions
- (2013) Nicolas Heslot et al. THEORETICAL AND APPLIED GENETICS
- Field high-throughput phenotyping: the new crop breeding frontier
- (2013) José Luis Araus et al. TRENDS IN PLANT SCIENCE
- Genomic Prediction of Northern Corn Leaf Blight Resistance in Maize with Combined or Separated Training Sets for Heterotic Groups
- (2013) Frank Technow et al. G3-Genes Genomes Genetics
- Accuracy of Genomewide Selection for Different Traits with Constant Population Size, Heritability, and Number of Markers
- (2013) Emily Combs et al. Plant Genome
- Assessing the Uncertainty when Using a Model to Compare Irrigation Strategies
- (2012) Daniel Wallach et al. AGRONOMY JOURNAL
- Back to Basics for Bayesian Model Building in Genomic Selection
- (2012) Hanni P. Kärkkäinen et al. GENETICS
- Maximizing the Reliability of Genomic Selection by Optimizing the Calibration Set of Reference Individuals: Comparison of Methods in Two Diverse Groups of Maize Inbreds (Zea mays L.)
- (2012) R. Rincent et al. GENETICS
- Improving accuracy of genomic predictions within and between dairy cattle breeds with imputed high-density single nucleotide polymorphism panels
- (2012) M. Erbe et al. JOURNAL OF DAIRY SCIENCE
- Genomic and metabolic prediction of complex heterotic traits in hybrid maize
- (2012) Christian Riedelsheimer et al. NATURE GENETICS
- A Gene Regulatory Network Model for Floral Transition of the Shoot Apex in Maize and Its Dynamic Modeling
- (2012) Zhanshan Dong et al. PLoS One
- Nonparametric Method for Genomics-Based Prediction of Performance of Quantitative Traits Involving Epistasis in Plant Breeding
- (2012) Xiaochun Sun et al. PLoS One
- Genome-wide association mapping of leaf metabolic profiles for dissecting complex traits in maize
- (2012) C. Riedelsheimer et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- On sequential Monte Carlo, partial rejection control and approximate Bayesian computation
- (2012) G. W. Peters et al. STATISTICS AND COMPUTING
- Assessing Parameter Identifiability in Phylogenetic Models Using Data Cloning
- (2012) José Miguel Ponciano et al. SYSTEMATIC BIOLOGY
- Effectiveness of Genomic Prediction of Maize Hybrid Performance in Different Breeding Populations and Environments
- (2012) Vanessa S. Windhausen et al. G3-Genes Genomes Genetics
- Using Whole-Genome Sequence Data to Predict Quantitative Trait Phenotypes in Drosophila melanogaster
- (2012) Ulrike Ober et al. PLoS Genetics
- Ecological genetics of invasive alien species
- (2011) L.-J. Lawson Handley et al. BIOCONTROL
- An in silico compartmentalized metabolic model of Brassica napus enables the systemic study of regulatory aspects of plant central metabolism
- (2011) Eleftherios Pilalis et al. BIOTECHNOLOGY AND BIOENGINEERING
- Extension of the bayesian alphabet for genomic selection
- (2011) David Habier et al. BMC BIOINFORMATICS
- Genomic Selection in Plant Breeding: A Comparison of Models
- (2011) Nicolas Heslot et al. CROP SCIENCE
- High-throughput non-destructive biomass determination during early plant development in maize under field conditions
- (2011) J.M. Montes et al. FIELD CROPS RESEARCH
- A Bayesian Antedependence Model for Whole Genome Prediction
- (2011) W. Yang et al. GENETICS
- Accelerating the domestication of trees using genomic selection: accuracy of prediction models across ages and environments
- (2011) M. F. R. Resende et al. NEW PHYTOLOGIST
- Zea mays iRS1563: A Comprehensive Genome-Scale Metabolic Reconstruction of Maize Metabolism
- (2011) Rajib Saha et al. PLoS One
- Evaluation of genome-wide selection efficiency in maize nested association mapping populations
- (2011) Zhigang Guo et al. THEORETICAL AND APPLIED GENETICS
- Ridge Regression and Other Kernels for Genomic Selection with R Package rrBLUP
- (2011) Jeffrey B. Endelman Plant Genome
- How much detail and accuracy is required in plant growth sub-models to address questions about optimal management strategies in agricultural systems?
- (2011) Michael Renton AoB Plants
- ABC-SysBio--approximate Bayesian computation in Python with GPU support
- (2010) J. Liepe et al. BIOINFORMATICS
- Accurate Prediction of Genetic Values for Complex Traits by Whole-Genome Resequencing
- (2010) T. Meuwissen et al. GENETICS
- The Impact of Genetic Architecture on Genome-Wide Evaluation Methods
- (2010) H. D. Daetwyler et al. GENETICS
- Yield–trait performance landscapes: from theory to application in breeding maize for drought tolerance
- (2010) Carlos D. Messina et al. JOURNAL OF EXPERIMENTAL BOTANY
- Adapting APSIM to model the physiology and genetics of complex adaptive traits in field crops
- (2010) Graeme L. Hammer et al. JOURNAL OF EXPERIMENTAL BOTANY
- Approximate Bayesian Computation (ABC) in practice
- (2010) Katalin Csilléry et al. TRENDS IN ECOLOGY & EVOLUTION
- Modeling QTL for complex traits: detection and context for plant breeding
- (2009) Mark Cooper et al. CURRENT OPINION IN PLANT BIOLOGY
- Genetical metabolomics: closing in on phenotypes
- (2009) Joost JB Keurentjes CURRENT OPINION IN PLANT BIOLOGY
- Simulating the Yield Impacts of Organ-Level Quantitative Trait Loci Associated With Drought Response in Maize: A “Gene-to-Phenotype” Modeling Approach
- (2009) Karine Chenu et al. GENETICS
- ABC: A useful Bayesian tool for the analysis of population data
- (2009) J.S. Lopes et al. INFECTION GENETICS AND EVOLUTION
- Approximate Bayesian computation scheme for parameter inference and model selection in dynamical systems
- (2008) T. Toni et al. Journal of the Royal Society Interface
- Personal genomes: The case of the missing heritability
- (2008) Brendan Maher NATURE
- Short-term responses of leaf growth rate to water deficit scale up to whole-plant and crop levels: an integrated modelling approach in maize
- (2008) KARINE CHENU et al. PLANT CELL AND ENVIRONMENT
- Metabolomics-assisted breeding: a viable option for crop improvement?
- (2008) Alisdair R. Fernie et al. TRENDS IN GENETICS
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