Review
Oncology
Qinghua Wu, Li You, Eugenie Nepovimova, Zbynek Heger, Wenda Wu, Kamil Kuca, Vojtech Adam
Summary: Hypoxia in the tumor microenvironment weakens cytotoxic T cell function and promotes recruitment of regulatory T cells, thereby reducing tumor immunogenicity. Hypoxia-inducible factors (HIFs), especially HIF1A and HIF2A, play important roles in tumor immune escape through various mechanisms. Understanding these mechanisms can lead to the development of targeted therapies for tumor treatment.
JOURNAL OF HEMATOLOGY & ONCOLOGY
(2022)
Article
Nanoscience & Nanotechnology
Wen-Sheng Tzeng, Wei-Lin Teng, Pao-Hsien Huang, Tzu-Ching Lin, Feng-Lin Yen, Yow-Ling Shiue
Summary: The study demonstrated that the prepared PTS nanoparticles (PSN) showed better antihepatoma activities in HepG2 cells, especially under hypoxic conditions, and effectively improved the water solubility and drug release of PTS.
INTERNATIONAL JOURNAL OF NANOMEDICINE
(2021)
Article
Gastroenterology & Hepatology
Peter A. C. Wing, Peter Jianrui Liu, James M. Harris, Andrea Magri, Thomas Michler, Xiaodong Zhuang, Helene Borrmann, Rosalba Minisini, Nicholas R. Frampton, Jochen M. Wettengel, Laurent Mailly, Valentina D'Arienzo, Tobias Riedl, Luis Nobre, Michael P. Weekes, Mario Pirisi, Mathias Heikenwalder, Thomas F. Baumert, Ester M. Hammond, David R. Mole, Ulrike Protzer, Peter Balfe, Jane A. McKeating
Summary: HIFs play a crucial role in regulating HBV replication, revealing an evolutionary mechanism by which HBV exploits the HIF signaling pathway to persist in the low oxygen environment of the liver.
JOURNAL OF HEPATOLOGY
(2021)
Article
Biochemistry & Molecular Biology
H. S. Jeffrey Man, Noeline Subramaniam, Tiana Downs, Aravin N. Sukumar, Aninda D. Saha, Ranju Nair, Lucy Chen, Daniel Teitelbaum, Paul J. Turgeon, Kyung Ha Ku, Eileen Tran, Marc de Perrot, Philip A. Marsden
Summary: A novel EC-enriched lncRNA, GATA2-AS1, was discovered to be involved in the physiologic adaptation and angiogenesis of vascular endothelial cells. It regulates HIF1-alpha induction and mitochondrial biogenesis in acute hypoxia. Additionally, GATA2-AS1 plays a role in angiogenesis and is perturbed in atherosclerotic disease.
JOURNAL OF BIOLOGICAL CHEMISTRY
(2023)
Review
Pharmacology & Pharmacy
Baoqi Yu, Xia Wang, Yanting Song, Guomin Xie, Shiyu Jiao, Li Shi, Xuejie Cao, Xinyao Han, Aijuan Qu
Summary: Cardiovascular diseases are the leading cause of death worldwide, and hypoxia-inducible factors (HIFs) play an important role in their pathogenesis. Recent studies have revealed the role of cell-specific HIFs in various cardiovascular diseases, but the potential clinical application of HIF inhibitors in the treatment of cardiovascular diseases is not well understood.
PHARMACOLOGY & THERAPEUTICS
(2022)
Article
Biochemistry & Molecular Biology
Guodan Zeng, Tao Wang, Jingyao Zhang, Y. James Kang, Li Feng
Summary: In hypoxic conditions, the ETS transcription factor FLI1 cooperates with HIF-1 alpha to activate the transcription of a subset of HIF-1 target genes, demonstrating a direct interaction between FLI1 and the promoter region of these genes.
Article
Biochemistry & Molecular Biology
Laura Puente-Santamaria, Lucia Sanchez-Gonzalez, Nuria Pescador, Oscar Martinez-Costa, Ricardo Ramos-Ruiz, Luis del Peso
Summary: This study utilized meta-analysis techniques to integrate multiple transcription datasets from different experimental conditions, revealing the impact of hypoxia on gene expression and identifying a set of robust hypoxia-regulated gene signatures.
Review
Pharmacology & Pharmacy
Xinguo Jiang, Wen Tian, Dongeon Kim, Alexander S. McQuiston, Ryan Vinh, Stanley G. Rockson, Gregg L. Semenza, Mark R. Nicolls
Summary: Lymphedema is a chronic inflammatory disorder with incomplete understanding of its pathology and lack of approved pharmacological therapy. Studying hypoxia-regulated pathways in lymphedema may lead to new treatment approaches.
FRONTIERS IN PHARMACOLOGY
(2022)
Review
Oncology
Daniela Magliulo, Rosa Bernardi
Summary: Hypoxia-inducible transcription factors (HIFs) play important roles in the regulation of leukemia, but their specific functions remain to be fully defined. HIFs are mainly driven by oxygen-labile alpha subunits HIF1α and HIF2α, and their activation may lead to opposite consequences in different types of leukemia.
FRONTIERS IN ONCOLOGY
(2022)
Article
Medicine, Research & Experimental
Min Kyung Park, Jun Ji, Keeok Haam, Tae-Hee Han, Seona Lim, Mi-Jung Kang, Soon Sung Lim, Hyun Seung Ban
Summary: Licochalcone A, a component of Glycyrrhiza uralensis, demonstrates potential as a therapeutic agent in hypoxic cancer cells by inhibiting HIF-1 alpha accumulation and mitochondrial respiration, leading to increased oxygen content and suppression of cancer cell viability.
BIOMEDICINE & PHARMACOTHERAPY
(2021)
Review
Cell Biology
Beatrice Foglia, Erica Novo, Francesca Protopapa, Marina Maggiora, Claudia Bocca, Stefania Cannito, Maurizio Parola
Summary: Liver fibrosis is a potentially reversible pathophysiological event characterized by excess deposition of extracellular matrix components, which is primarily driven by activated myofibroblasts and other hepatic cell populations involved in chronic liver disease progression. The emerging pathogenic role of hypoxia, hypoxia-inducible factors, and related mediators in the fibrogenic progression of chronic liver diseases is a key focus of research.
Review
Urology & Nephrology
Qiu-Yu Li, Fei Liu, Xiaoxiao Tang, Haidong Fu, Jianhua Mao
Summary: HIFs accumulate and regulate target genes under hypoxia, maintaining homeostasis during injury; pretreatment of HIF can protect the kidney from acute hypoxia and improve repair, but HIF's role in CKD and renal tumors is controversial; due to its mechanism in kidney disease, drugs targeting HIFs are widely researched and some are in clinical use or clinical research.
Article
Genetics & Heredity
Damir Baranasic, Matthias Hortenhuber, Piotr J. Balwierz, Tobias Zehnder, Abdul Kadir Mukarram, Chirag Nepal, Csilla Varnai, Yavor Hadzhiev, Ada Jimenez-Gonzalez, Nan Li, Joseph Wragg, Fabio M. D'Orazio, Dorde Relic, Mikhail Pachkov, Noelia Diaz, Benjamin Hernandez-Rodriguez, Zelin Chen, Marcus Stoiber, Michael Dong, Irene Stevens, Samuel E. Ross, Anne Eagle, Ryan Martin, Oluwapelumi Obasaju, Sepand Rastegar, Alison C. McGarvey, Wolfgang Kopp, Emily Chambers, Dennis Wang, Hyejeong R. Kim, Rafael D. Acemel, Silvia Naranjo, Maciej Lapinski, Vanessa Chong, Sinnakaruppan Mathavan, Bernard Peers, Tatjana Sauka-Spengler, Martin Vingron, Piero Carninci, Uwe Ohler, Scott Allen Lacadie, Shawn M. Burgess, Cecilia Winata, Freek van Eeden, Juan M. Vaquerizas, Jose Luis Gomez-Skarmeta, Daria Onichtchouk, Ben James Brown, Ozren Bogdanovic, Erik van Nimwegen, Monte Westerfield, Fiona C. Wardle, Carsten O. Daub, Boris Lenhard, Ferenc Muller
Summary: Zebrafish, an important model organism for studying embryonic development and human diseases, lacks a systematic functional annotation program. The international DANIO-CODE consortium addressed this issue by creating a central repository to store and process zebrafish developmental functional genomic data. They improved existing annotations and identified over 140,000 cis-regulatory elements throughout development. They also compared regulatory elements and epigenomic landscapes between zebrafish and mouse, predicting functional relationships between them. This study extends the utility of zebrafish developmental genomics to mammals.
Article
Pharmacology & Pharmacy
Sha Han, Dongyang Zhang, Qiang Dong, Xu Wang, Liang Wang
Summary: Neuroserpin deficiency in zebrafish exposed to CoCl2 induced hypoxic injury showed more development defects, neuronal loss, and vascular malformation compared to wide-type, indicating a protective role of neuroserpin against CoCl2 induced hypoxic injury by alleviating oxidative stress.
FRONTIERS IN PHARMACOLOGY
(2021)
Article
Biotechnology & Applied Microbiology
Wei Li, Xiaoyu Li, Xunjie Ma, Wei Xiao, Jingjing Zhang
Summary: This study presents the first comprehensive atlas of m1A, m5C, m6A, and m7G modifications in the epitranscriptome of the zebrafish brain and reveals their distribution in mRNA under hypoxic conditions. The findings provide valuable insights into the role of m1A, m5C, m6A, and m7G in the regulation of miRNA and repeat elements in vertebrates and offer new perspectives on studying brain hypoxic injury from the perspective of the epitranscriptome.