Complete Genome Sequence of Borrelia afzelii K78 and Comparative Genome Analysis

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Early Cytokine Release in Response to Live Borrelia burgdorferi Sensu Lato Spirochetes Is Largely Complement Independent

(2014) Kerstin Sandholm et al.   PLoS One

Distribution of cp32 Prophages among Lyme Disease-Causing Spirochetes and Natural Diversity of Their Lipoprotein-EncodingerpLoci

(2013) Dustin Brisson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation

(2013) Emmanuel F Mongodin et al.   BMC GENOMICS

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

In Vivo Expression Technology Identifies a Novel Virulence Factor Critical for Borrelia burgdorferi Persistence in Mice

(2013) Tisha Choudhury Ellis et al.   PLoS Pathogens

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

(2012) H. Thorvaldsdottir et al.   BRIEFINGS IN BIOINFORMATICS

Genome Sequence of Borrelia afzelii Strain HLJ01, Isolated from a Patient in China

(2012) B.-G. Jiang et al.   JOURNAL OF BACTERIOLOGY

Genome Sequence of Borrelia garinii Strain NMJW1, Isolated from China

(2012) Baogui Jiang et al.   JOURNAL OF BACTERIOLOGY

Whole-Genome Sequencing of Borrelia garinii BgVir, Isolated from Taiga Ticks (Ixodes persulcatus)

(2012) E. V. Brenner et al.   JOURNAL OF BACTERIOLOGY

CDD: conserved domains and protein three-dimensional structure

(2012) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Genome Stability of Lyme Disease Spirochetes: Comparative Genomics of Borrelia burgdorferi Plasmids

(2012) Sherwood R. Casjens et al.   PLoS One

Analysis of an Ordered, Comprehensive STM Mutant Library in Infectious Borrelia burgdorferi: Insights into the Genes Required for Mouse Infectivity

(2012) Tao Lin et al.   PLoS One

Whole-Genome Sequences of Two Borrelia afzelii and Two Borrelia garinii Lyme Disease Agent Isolates

(2011) S. R. Casjens et al.   JOURNAL OF BACTERIOLOGY

Whole-Genome Sequences of Borrelia bissettii, Borrelia valaisiana, and Borrelia spielmanii

(2011) S. E. Schutzer et al.   JOURNAL OF BACTERIOLOGY

Whole Genome Sequence of an Unusual Borrelia burgdorferi Sensu Lato Isolate

(2011) S. R. Casjens et al.   JOURNAL OF BACTERIOLOGY

Lyme borreliosis

(2011) Gerold Stanek et al.   LANCET

Bioluminescent imaging of Borrelia burgdorferi in vivo demonstrates that the fibronectin-binding protein BBK32 is required for optimal infectivity

(2011) Jenny A. Hyde et al.   MOLECULAR MICROBIOLOGY

Reorganizing the protein space at the Universal Protein Resource (UniProt)

(2011)   NUCLEIC ACIDS RESEARCH

Loss of plasmids of Borrelia burgdorferi sensu lato during prolonged in vitro cultivation

(2011) Urška Glinšek Biškup et al.   PLASMID

Molecular Interactions that Enable Movement of the Lyme Disease Agent from the Tick Gut into the Hemolymph

(2011) Lili Zhang et al.   PLoS Pathogens

High-Throughput Plasmid Content Analysis ofBorrelia burgdorferiB31 by Using Luminex Multiplex Technology

(2010) Steven J. Norris et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity of 16S rRNA Genes within Individual Prokaryotic Genomes

(2010) A. Y. Pei et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes

(2010) Nancy Y. Yu et al.   BIOINFORMATICS

Whole-Genome Sequences of Thirteen Isolates of Borrelia burgdorferi

(2010) S. E. Schutzer et al.   JOURNAL OF BACTERIOLOGY

Identification and function of the RNA chaperone Hfq in the Lyme disease spirochete Borrelia burgdorferi

(2010) Meghan C. Lybecker et al.   MOLECULAR MICROBIOLOGY

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

(2010) Aaron E. Darling et al.   PLoS One

Evolution and Distribution of the ospC Gene, a Transferable Serotype Determinant of Borrelia burgdorferi

(2010) A. G. Barbour et al.   mBio

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Fast, adaptive evolution at a bacterial host-resistance locus: The PFam54 gene array in Borrelia burgdorferi

(2009) Ewa Wywial et al.   GENE

Borrelia burgdorferi RevA Antigen Binds Host Fibronectin

(2009) C. A. Brissette et al.   INFECTION AND IMMUNITY

Identification of the Determinant Conferring Permissive Substrate Usage in the Telomere Resolvase, ResT

(2009) Tara J. Moriarty et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Characterization andin VitroReaction Properties of 19 Unique Hairpin Telomeres from the Linear Plasmids of the Lyme Disease Spirochete

(2009) Yvonne Tourand et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Prediction of translation initiation site for microbial genomes with TriTISA

(2008) Gang-Qing Hu et al.   BIOINFORMATICS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Borrelia burgdorferi Surface-Localized Proteins Expressed during Persistent Murine Infection Are Conserved among Diverse Borrelia spp.

(2008) J. L. Hughes et al.   INFECTION AND IMMUNITY

Rfam: updates to the RNA families database

(2008) P. P. Gardner et al.   NUCLEIC ACIDS RESEARCH

MLST of housekeeping genes captures geographic population structure and suggests a European origin of Borrelia burgdorferi

(2008) G. Margos et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Release of latent ClyA cytolysin from Escherichia coli mediated by a bacteriophage-associated putative holin (BlyA) from Borrelia burgdorferi

(2007) Albrecht Ludwig et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY