Genome-Based Comparative Analyses of Antarctic and Temperate Species of Paenibacillus

Paenibacillus darwinianus sp. nov., isolated from gamma-irradiated Antarctic soil

(2014) M. Dsouza et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Soil bacterial communities shaped by geochemical factors and land use in a less-explored area, Tibetan Plateau

(2013) Xiangyu Guan et al.   BMC GENOMICS

Bacterial composition of soils of the Lake Wellman area, Darwin Mountains, Antarctica

(2013) Jackie M. Aislabie et al.   EXTREMOPHILES

Resistance and resilience of the forest soil microbiome to logging-associated compaction

(2013) Martin Hartmann et al.   ISME Journal

Bacterial growth at −15 °C; molecular insights from the permafrost bacterium Planococcus halocryophilus Or1

(2013) Nadia C S Mykytczuk et al.   ISME Journal

The Sensor Kinase DctS Forms a Tripartite Sensor Unit with DctB and DctA for Sensing C4-Dicarboxylates in Bacillus subtilis

(2013) S. Graf et al.   JOURNAL OF BACTERIOLOGY

Airborne Bacterial Populations Above Desert Soils of the McMurdo Dry Valleys, Antarctica

(2013) Eric M. Bottos et al.   MICROBIAL ECOLOGY

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

(2013) Mads Albertsen et al.   NATURE BIOTECHNOLOGY

Factors Controlling Soil Microbial Biomass and Bacterial Diversity and Community Composition in a Cold Desert Ecosystem: Role of Geographic Scale

(2013) David J. Van Horn et al.   PLoS One

CMG-Biotools, a Free Workbench for Basic Comparative Microbial Genomics

(2013) Tammi Vesth et al.   PLoS One

The cell biology of peritrichous flagella inBacillus subtilis

(2012) Sarah B. Guttenplan et al.   MOLECULAR MICROBIOLOGY

A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs

(2012) Martin T Swain et al.   Nature Protocols

Rapid microbial response to the presence of an ancient relic in the Antarctic Dry Valleys

(2012) Grace Tiao et al.   Nature Communications

Microbial biomass and community structure changes along a soil development chronosequence near Lake Wellman, southern Victoria Land

(2011) Jackie Aislabie et al.   ANTARCTIC SCIENCE

Identification of Cold-Temperature-Regulated Genes inFlavobacterium psychrophilum

(2011) Shohreh Hesami et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genome sequence of the pattern forming Paenibacillus vortex bacterium reveals potential for thriving in complex environments

(2011) Alexandra Sirota-Madi et al.   BMC GENOMICS

Updated genome assembly and annotation of Paenibacillus larvae, the agent of American foulbrood disease of honey bees

(2011) Queenie WT Chan et al.   BMC GENOMICS

The Inter-Valley Soil Comparative Survey: the ecology of Dry Valley edaphic microbial communities

(2011) Charles K Lee et al.   ISME Journal

454 Pyrosequencing reveals bacterial diversity of activated sludge from 14 sewage treatment plants

(2011) Tong Zhang et al.   ISME Journal

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata

(2011) I. Pagani et al.   NUCLEIC ACIDS RESEARCH

IMG: the integrated microbial genomes database and comparative analysis system

(2011) V. M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

Bacillus subtilis Two-Component System Sensory Kinase DegS Is Regulated by Serine Phosphorylation in Its Input Domain

(2011) Carsten Jers et al.   PLoS One

Activity of abundant and rare bacteria in a coastal ocean

(2011) B. J. Campbell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Genome Sequence of Psychrobacter arcticus 273-4, a Psychroactive Siberian Permafrost Bacterium, Reveals Mechanisms for Adaptation to Low-Temperature Growth

(2010) H. L. Ayala-del-Rio et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

Prodigal: prokaryotic gene recognition and translation initiation site identification

(2010) Doug Hyatt et al.   BMC BIOINFORMATICS

Soil Microbial Abundance and Diversity Along a Low Precipitation Gradient

(2010) Ami Bachar et al.   MICROBIAL ECOLOGY

Temporal and spatial variation in active layer depth in the McMurdo Sound Region, Antarctica

(2009) Leah S. Adlam et al.   ANTARCTIC SCIENCE

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genomics of an extreme psychrophile, Psychromonas ingrahamii

(2009) Monica Riley et al.   BMC GENOMICS

Bacterial diversity associated with ornithogenic soil of the Ross Sea region, AntarcticaThis article is one of a selection of papers in the Special Issue on Polar and Alpine Microbiology.

(2009) J. Aislabie et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Isotopic evidence for the provenance and turnover of organic carbon by soil microorganisms in the Antarctic dry valleys

(2009) D. W. Hopkins et al.   ENVIRONMENTAL MICROBIOLOGY

Crenarchaeotaaffiliated with group 1.1b are prevalent in coastal mineral soils of the Ross Sea region of Antarctica

(2009) J. Ayton et al.   ENVIRONMENTAL MICROBIOLOGY

Paenibacillus tundrae sp. nov. and Paenibacillus xylanexedens sp. nov., psychrotolerant, xylan-degrading bacteria from Alaskan tundra

(2009) D. M. Nelson et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Paenibacillus glacialis sp. nov., isolated from the Kafni glacier of the Himalayas, India

(2009) K. H. Kishore et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean

(2009) Regina Schauer et al.   ISME Journal

The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation

(2009) Michelle A Allen et al.   ISME Journal

Paenibacillus pinihumi sp. nov., a cellulolytic bacterium isolated from the rhizosphere of Pinus densiflora

(2009) Byung-Chun Kim et al.   JOURNAL OF MICROBIOLOGY

Highly specialized microbial diversity in hyper-arid polar desert

(2009) S. B. Pointing et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Novelty and Uniqueness Patterns of Rare Members of the Soil Biosphere

(2008) M. S. Elshahed et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Responses of Bacillus subtilis to Hypotonic Challenges: Physiological Contributions of Mechanosensitive Channels to Cellular Survival

(2008) T. Hoffmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial community composition in soils of Northern Victoria Land, Antarctica

(2008) Thomas D. Niederberger et al.   ENVIRONMENTAL MICROBIOLOGY

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Diversity rankings among bacterial lineages in soil

(2008) Noha H Youssef et al.   ISME Journal

A core gut microbiome in obese and lean twins

(2008) Peter J. Turnbaugh et al.   NATURE

Toward an Online Repository of Standard Operating Procedures (SOPs) for (Meta)genomic Annotation

(2008) Samuel V. Angiuoli et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Relation between soil classification and bacterial diversity in soils of the Ross Sea region, Antarctica

(2007) J.M. Aislabie et al.   GEODERMA