Characterization of Chemically Induced Liver Injuries Using Gene Co-Expression Modules

Phosphodiesterase-4 Inhibitor Therapy for Lung Diseases

(2013) Bianca Beghè et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

The Rat Genome Database 2013--data, tools and users

(2013) S. J. F. Laulederkind et al.   BRIEFINGS IN BIOINFORMATICS

The Role of Estrogens in Control of Energy Balance and Glucose Homeostasis

(2013) Franck Mauvais-Jarvis et al.   ENDOCRINE REVIEWS

Systems Biology Approaches for Discovering Biomarkers for Traumatic Brain Injury

(2013) Jacob D. Feala et al.   JOURNAL OF NEUROTRAUMA

Characterization of drug-induced transcriptional modules: towards drug repositioning and functional understanding

(2013) M. Iskar et al.   Molecular Systems Biology

Systems Pharmacology to Predict Drug Toxicity: Integration Across Levels of Biological Organization

(2012) Jane P.F. Bai et al.   Annual Review of Pharmacology and Toxicology

Inferring high-confidence human protein-protein interactions

(2012) Xueping Yu et al.   BMC BIOINFORMATICS

Estradiol enhances effects of fructose rich diet on cardiac fatty acid transporter CD36 and triglycerides accumulation

(2012) Goran Korićanac et al.   EUROPEAN JOURNAL OF PHARMACOLOGY

The Comparative Toxicogenomics Database: update 2013

(2012) Allan Peter Davis et al.   NUCLEIC ACIDS RESEARCH

NCBI GEO: archive for functional genomics data sets—update

(2012) Tanya Barrett et al.   NUCLEIC ACIDS RESEARCH

The impact of network biology in pharmacology and toxicology

(2012) G. Panagiotou et al.   SAR AND QSAR IN ENVIRONMENTAL RESEARCH

Incidence and US Costs of Corticosteroid-Associated Adverse Events: A Systematic Literature Review

(2011) Evelyn Sarnes et al.   CLINICAL THERAPEUTICS

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Modular analysis of gene expression data with R

(2010) G. Csardi et al.   BIOINFORMATICS

Systems Responses of Rats to Aflatoxin B1 Exposure Revealed with Metabonomic Changes in Multiple Biological Matrices

(2010) Limin Zhang et al.   JOURNAL OF PROTEOME RESEARCH

Independent filtering increases detection power for high-throughput experiments

(2010) R. Bourgon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomics: Applications in mechanism elucidation

(2009) Venita Gresham et al.   ADVANCED DRUG DELIVERY REVIEWS

Ghrelin attenuates hepatocellular injury and liver fibrogenesis in rodents and influences fibrosis progression in humans

(2009) Montserrat Moreno et al.   HEPATOLOGY

Attenuation of N-nitrosodiethylamine-induced liver fibrosis by high-molecular-weight fucoidan derived fromCladosiphon okamuranus

(2009) Kyoumi Nakazato et al.   JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY

The Japanese toxicogenomics project: Application of toxicogenomics

(2009) Takeki Uehara et al.   MOLECULAR NUTRITION & FOOD RESEARCH

Application of connectivity mapping in predictive toxicology based on gene-expression similarity

(2009) Joshua L. Smalley et al.   TOXICOLOGY

arrayQualityMetrics—a bioconductor package for quality assessment of microarray data

(2008) Audrey Kauffmann et al.   BIOINFORMATICS

A comparison of machine learning algorithms for chemical toxicity classification using a simulated multi-scale data model

(2008) Richard Judson et al.   BMC BIOINFORMATICS

The liver pharmacological and xenobiotic gene response repertoire

(2008) Georges Natsoulis et al.   Molecular Systems Biology

Integration of Clinical Chemistry, Expression, and Metabolite Data Leads to Better Toxicological Class Separation

(2008) Jeppe S. Spicker et al.   TOXICOLOGICAL SCIENCES

Use of toxicogenomics to understand mechanisms of drug-induced hepatotoxicity during drug discovery and development

(2008) Eric A.G. Blomme et al.   TOXICOLOGY LETTERS

The current state of serum biomarkers of hepatotoxicity

(2007) Josef Ozer et al.   TOXICOLOGY