Structure, Composition and Metagenomic Profile of Soil Microbiomes Associated to Agricultural Land Use and Tillage Systems in Argentine Pampas

Soil metagenomics reveals differences under conventional and no-tillage with crop rotation or succession

(2013) Renata Carolini Souza et al.   APPLIED SOIL ECOLOGY

Soil organic carbon fraction losses upon continuous plow-based tillage and its restoration by diverse biomass-C inputs under no-till in sub-tropical and tropical regions of Brazil

(2013) Florent Tivet et al.   GEODERMA

Temporal variability in soil microbial communities across land-use types

(2013) Christian L Lauber et al.   ISME Journal

Dust Unto Dust

(2013) M. C. Scholes et al.   SCIENCE

Reconstructing the Microbial Diversity and Function of Pre-Agricultural Tallgrass Prairie Soils in the United States

(2013) N. Fierer et al.   SCIENCE

The PAMPA datasets: a metagenomic survey of microbial communities in Argentinean pampean soils

(2013) Nicolás Rascovan et al.   Microbiome

Assessment of microbial community function and structure in soil microcosms exposed to glyphosate

(2012) María C. Zabaloy et al.   APPLIED SOIL ECOLOGY

Land use effects on soil carbon in the Argentine Pampas

(2012) Gonzalo Berhongaray et al.   GEODERMA

Soil aggregation and organic carbon protection in a no-tillage chronosequence under Mediterranean conditions

(2012) D. Plaza-Bonilla et al.   GEODERMA

Consistent effects of nitrogen amendments on soil microbial communities and processes across biomes

(2012) Kelly S. Ramirez et al.   GLOBAL CHANGE BIOLOGY

Structure, fluctuation and magnitude of a natural grassland soil metagenome

(2012) Tom O Delmont et al.   ISME Journal

Bacterial Indicator of Agricultural Management for Soil under No-Till Crop Production

(2012) Eva L. M. Figuerola et al.   PLoS One

Cross-biome metagenomic analyses of soil microbial communities and their functional attributes

(2012) N. Fierer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple B-vitamin depletion in large areas of the coastal ocean

(2012) S. A. Sanudo-Wilhelmy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global Biogeography and Quantitative Seasonal Dynamics of Gemmatimonadetes in Soil

(2011) Jennifer M. DeBruyn et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genotypic analysis of isolated peanut-nodulating rhizobial strains reveals differences among populations obtained from soils with different cropping histories

(2011) Fiorela Nievas et al.   APPLIED SOIL ECOLOGY

Specific enumeration and analysis of the community structure of culturable pseudomonads in agricultural soils under no-till management in Argentina

(2011) Betina Agaras et al.   APPLIED SOIL ECOLOGY

Spatial variability overwhelms seasonal patterns in bacterioplankton communities across a river to ocean gradient

(2011) Caroline S Fortunato et al.   ISME Journal

Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients

(2011) Noah Fierer et al.   ISME Journal

Solutions for a cultivated planet

(2011) Jonathan A. Foley et al.   NATURE

α-ketoglutarate coordinates carbon and nitrogen utilization via enzyme I inhibition

(2011) Christopher D Doucette et al.   Nature Chemical Biology

Global food demand and the sustainable intensification of agriculture

(2011) D. Tilman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Insights into Syntrophy: The Paradigm for Anaerobic Metabolic Cooperation

(2010) Jessica R. Sieber et al.   Annual Review of Microbiology

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Consistent effects of nitrogen fertilization on soil bacterial communities in contrasting systems

(2010) Kelly S. Ramirez et al.   ECOLOGY

Stoichiometric control of organic carbon–nitrate relationships from soils to the sea

(2010) Philip G. Taylor et al.   NATURE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Ecosystem services and agriculture: tradeoffs and synergies

(2010) A. G. Power   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Pantothenate Kinase 1 Is Required to Support the Metabolic Transition from the Fed to the Fasted State

(2010) Roberta Leonardi et al.   PLoS One

Structural basis for recognition of S-adenosylhomocysteine by riboswitches

(2010) A. L. Edwards et al.   RNA

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Syntrophy in anaerobic global carbon cycles

(2009) Michael J McInerney et al.   CURRENT OPINION IN BIOTECHNOLOGY

Shifts betweenNitrospira- andNitrobacter-like nitrite oxidizers underlie the response of soil potential nitrite oxidation to changes in tillage practices

(2009) E. Attard et al.   ENVIRONMENTAL MICROBIOLOGY

Complete genome of the cellulolytic thermophile Acidothermus cellulolyticus 11B provides insights into its ecophysiological and evolutionary adaptations

(2009) R. D. Barabote et al.   GENOME RESEARCH

The spread of Conservation Agriculture: justification, sustainability and uptake

(2009) Amir Kassam et al.   International Journal of Agricultural Sustainability

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genomic basis of trophic strategy in marine bacteria

(2009) F. M. Lauro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A review of the effects of tillage systems on some soil physical properties, water content, nitrate availability and crops yield in the Argentine Pampas

(2009) R. Alvarez et al.   SOIL & TILLAGE RESEARCH

Humic acids buffer the effects of urea on soil ammonia oxidizers and potential nitrification

(2009) Lianhua Dong et al.   SOIL BIOLOGY & BIOCHEMISTRY

An integrated approach to evaluate the impacts of the herbicides glyphosate, 2,4-D and metsulfuron-methyl on soil microbial communities in the Pampas region, Argentina

(2008) María C. Zabaloy et al.   APPLIED SOIL ECOLOGY

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

The effects of chronic nitrogen fertilization on alpine tundra soil microbial communities: implications for carbon and nitrogen cycling

(2008) Diana R. Nemergut et al.   ENVIRONMENTAL MICROBIOLOGY

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Defined spatial structure stabilizes a synthetic multispecies bacterial community

(2008) H. J. Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA