New Hydrocarbon Degradation Pathways in the Microbial Metagenome from Brazilian Petroleum Reservoirs
出版年份 2014 全文链接
标题
New Hydrocarbon Degradation Pathways in the Microbial Metagenome from Brazilian Petroleum Reservoirs
作者
关键词
Metagenomics, Gene prediction, Cloning, Aromatic hydrocarbons, Hydrocarbons, Sequence databases, Xenobiotic metabolism, Petroleum
出版物
PLoS One
Volume 9, Issue 2, Pages e90087
出版商
Public Library of Science (PLoS)
发表日期
2014-02-27
DOI
10.1371/journal.pone.0090087
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Epoxy Coenzyme A Thioester Pathways for Degradation of Aromatic Compounds
- (2012) Wael Ismail et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Diversity analyses of microbial communities in petroleum samples from Brazilian oil fields
- (2012) T.R. Silva et al. INTERNATIONAL BIODETERIORATION & BIODEGRADATION
- Bacterial Degradation of Benzoate
- (2012) J. Andrés Valderrama et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- The CRISPR Associated Protein Cas4 Is a 5′ to 3′ DNA Exonuclease with an Iron-Sulfur Cluster
- (2012) Jing Zhang et al. PLoS One
- MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
- (2011) K. Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Microbial degradation of aromatic compounds — from one strategy to four
- (2011) Georg Fuchs et al. NATURE REVIEWS MICROBIOLOGY
- Reorganizing the protein space at the Universal Protein Resource (UniProt)
- (2011) NUCLEIC ACIDS RESEARCH
- The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata
- (2011) I. Pagani et al. NUCLEIC ACIDS RESEARCH
- The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
- (2011) R. Caspi et al. NUCLEIC ACIDS RESEARCH
- Elucidating the reaction mechanism of the benzoate oxidation pathway encoded aldehyde dehydrogenase fromBurkholderia xenovoransLB400
- (2011) Jasleen Bains et al. PROTEIN SCIENCE
- A call for standardized classification of metagenome projects
- (2010) Natalia Ivanova et al. ENVIRONMENTAL MICROBIOLOGY
- Ab initio gene identification in metagenomic sequences
- (2010) Wenhan Zhu et al. NUCLEIC ACIDS RESEARCH
- Screening for hydrocarbon biodegraders in a metagenomic clone library derived from Brazilian petroleum reservoirs
- (2010) Suzan Pantaroto de Vasconcellos et al. ORGANIC GEOCHEMISTRY
- Genome Sequence of the Deltaproteobacterial Strain NaphS2 and Analysis of Differential Gene Expression during Anaerobic Growth on Naphthalene
- (2010) Raymond J. DiDonato et al. PLoS One
- Novel metal-binding site of Pseudomonas reinekei MT1 trans-dienelactone hydrolase
- (2009) Macarena Marín et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
- (2009) Kennan Salinero et al. BMC GENOMICS
- Functional metagenomics for enzyme discovery: challenges to efficient screening
- (2009) Taku Uchiyama et al. CURRENT OPINION IN BIOTECHNOLOGY
- Novel organization of aromatic degradation pathway genes in a microbial community as revealed by metagenomic analysis
- (2009) Hikaru Suenaga et al. ISME Journal
- Anaerobic Catabolism of Aromatic Compounds: a Genetic and Genomic View
- (2009) M. Carmona et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Two novel metal-independent long-chain alkyl alcohol dehydrogenases from Geobacillus thermodenitrificans NG80-2
- (2009) X. Liu et al. MICROBIOLOGY-SGM
- Degradation of chloroaromatics by Pseudomonas putida GJ31: assembled route for chlorobenzene degradation encoded by clusters on plasmid pKW1 and the chromosome
- (2009) M. Kunze et al. MICROBIOLOGY-SGM
- Isolation, biodegradation ability and molecular detection of hydrocarbon degrading bacteria in petroleum samples from a Brazilian offshore basin
- (2009) Suzan Pantaroto de Vasconcellos et al. ORGANIC GEOCHEMISTRY
- Anaerobic Metabolism of Aromatic Compounds
- (2008) Georg Fuchs Annals of the New York Academy of Sciences
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
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