Redefining the Human Oral Mycobiome with Improved Practices in Amplicon-based Taxonomy: Discovery of Malassezia as a Prominent Commensal

Transplantation-Associated Long-Term Immunosuppression Promotes Oral Colonization by Potentially Opportunistic Pathogens without Impacting Other Members of the Salivary Bacteriome

(2013) Patricia I. Diaz et al.   Clinical and Vaccine Immunology

Taxonomic revision of Eurotium and transfer of species to Aspergillus

(2013) Vit Hubka et al.   MYCOLOGIA

Topographic diversity of fungal and bacterial communities in human skin

(2013) Keisha Findley et al.   NATURE

Utilizing pyrosequencing and quantitative PCR to characterize fungal populations among house dust samples

(2012) Matthew W. Nonnenmann et al.   JOURNAL OF ENVIRONMENTAL MONITORING

Using high throughput sequencing to explore the biodiversity in oral bacterial communities

(2012) P.I. Diaz et al.   Molecular Oral Microbiology

Emerging fungal threats to animal, plant and ecosystem health

(2012) Matthew C. Fisher et al.   NATURE

Characterization of the Fungal Microbiota (Mycobiome) in Healthy and Dandruff-Afflicted Human Scalps

(2012) Hee Kuk Park et al.   PLoS One

The Airway Microbiota in Cystic Fibrosis: A Complex Fungal and Bacterial Community—Implications for Therapeutic Management

(2012) Laurence Delhaes et al.   PLoS One

Groundtruthing Next-Gen Sequencing for Microbial Ecology–Biases and Errors in Community Structure Estimates from PCR Amplicon Pyrosequencing

(2012) Charles K. Lee et al.   PLoS One

Tackling Human Fungal Infections

(2012) G. D. Brown et al.   SCIENCE

Malassezia Fungi Are Specialized to Live on Skin and Associated with Dandruff, Eczema, and Other Skin Diseases

(2012) Charles W. Saunders et al.   PLoS Pathogens

The impacts of the discontinuation of dual nomenclature of pleomorphic fungi: the trivial facts, problems, and strategies

(2012) Uwe Braun   IMA Fungus

Managing and coping with names of pleomorphic fungi in a period of transition

(2012) David L. Hawksworth   IMA Fungus

The Fungi: 1, 2, 3 … 5.1 million species?

(2011) Meredith Blackwell   AMERICAN JOURNAL OF BOTANY

Fast Identification and Removal of Sequence Contamination from Genomic and Metagenomic Datasets

(2011) Robert Schmieder et al.   PLoS One

Beyond Bacteria: A Study of the Enteric Microbial Consortium in Extremely Low Birth Weight Infants

(2011) Mariam Susan LaTuga et al.   PLoS One

A new dawn for the naming of fungi: impacts of decisions made in Melbourne in July 2011 on the future publication and regulation of fungal names

(2011) David l. Hawksworth   IMA Fungus

The Amsterdam Declaration on Fungal Nomenclature

(2011) David L. Hawksworth et al.   IMA Fungus

One Fungus = One Name: DNA and fungal nomenclature twenty years after PCR

(2011) John W. Taylor   IMA Fungus

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

(2010) Leho Tedersoo et al.   NEW PHYTOLOGIST

Indoor fungal composition is geographically patterned and more diverse in temperate zones than in the tropics

(2010) A. S. Amend et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of the Oral Fungal Microbiome (Mycobiome) in Healthy Individuals

(2010) Mahmoud A. Ghannoum et al.   PLoS Pathogens

Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences

(2010) Jeremy Goecks et al.   GENOME BIOLOGY