Nef-Specific CD8+ T Cell Responses Contribute to HIV-1 Immune Control

Frequent and Variable Cytotoxic-T-Lymphocyte Escape-Associated Fitness Costs in the Human Immunodeficiency Virus Type 1 Subtype B Gag Proteins

(2013) C. L. Boutwell et al.   JOURNAL OF VIROLOGY

A Novel Protective MHC-I Haplotype Not Associated with Dominant Gag-Specific CD8+ T-Cell Responses in SIVmac239 Infection of Burmese Rhesus Macaques

(2013) Naofumi Takahashi et al.   PLoS One

Attenuation of multiple Nef functions in HIV-1 elite controllers

(2013) Philip Mwimanzi et al.   Retrovirology

Escape from CD8+ T Cell Responses in Mamu-B*00801+ Macaques Differentiates Progressors from Elite Controllers

(2012) P. A. Mudd et al.   JOURNAL OF IMMUNOLOGY

HIV Control through a Single Nucleotide on the HLA-B Locus

(2012) H. N. Kloverpris et al.   JOURNAL OF VIROLOGY

Correlates of Protective Cellular Immunity Revealed by Analysis of Population-Level Immune Escape Pathways in HIV-1

(2012) J. M. Carlson et al.   JOURNAL OF VIROLOGY

Differential Clade-Specific HLA-B*3501 Association with HIV-1 Disease Outcome Is Linked to Immunogenicity of a Single Gag Epitope

(2012) P. C. Matthews et al.   JOURNAL OF VIROLOGY

Specific CD8+ T Cell Responses Correlate with Control of Simian Immunodeficiency Virus Replication in Mauritian Cynomolgus Macaques

(2012) M. L. Budde et al.   JOURNAL OF VIROLOGY

Co-Operative Additive Effects between HLA Alleles in Control of HIV-1

(2012) Philippa C. Matthews et al.   PLoS One

One Protein to Rule them All: Modulation of Cell Surface Receptors and Molecules by HIV Nef

(2011) Alessia Landi et al.   CURRENT HIV RESEARCH

Translation of HLA-HIV Associations to the Cellular Level: HIV Adapts To Inflate CD8 T Cell Responses against Nef and HLA-Adapted Variant Epitopes

(2011) C.-A. M. Almeida et al.   JOURNAL OF IMMUNOLOGY

HLA-A*7401-Mediated Control of HIV Viremia Is Independent of Its Linkage Disequilibrium with HLA-B*5703

(2011) P. C. Matthews et al.   JOURNAL OF IMMUNOLOGY

Limited Immunogenicity of HIV CD8+ T-Cell Epitopes in Acute Clade C Virus Infection

(2011) Mopo Radebe et al.   JOURNAL OF INFECTIOUS DISEASES

Definition of the viral targets of protective HIV-1-specific T cell responses

(2011) Beatriz Mothe et al.   Journal of Translational Medicine

Increased Breadth and Depth of Cytotoxic T Lymphocytes Responses against HIV-1-B Nef by Inclusion of Epitope Variant Sequences

(2011) Morgane Rolland et al.   PLoS One

Fluidity of HIV-1-Specific T-Cell Responses during Acute and Early Subtype C HIV-1 Infection and Associations with Early Disease Progression

(2010) M. Mlotshwa et al.   JOURNAL OF VIROLOGY

Efficacious Early Antiviral Activity of HIV Gag- and Pol-Specific HLA-B*2705-Restricted CD8+T Cells

(2010) Rebecca P. Payne et al.   JOURNAL OF VIROLOGY

Additive Contribution of HLA Class I Alleles in the Immune Control of HIV-1 Infection

(2010) A. Leslie et al.   JOURNAL OF VIROLOGY

Macrophage signaling in HIV-1 infection

(2010) Georges Herbein et al.   Retrovirology

Two MHC Class I Molecules Associated with Elite Control of Immunodeficiency Virus Replication, Mamu-B*08 and HLA-B*2705, Bind Peptides with Sequence Similarity

(2009) J. T. Loffredo et al.   JOURNAL OF IMMUNOLOGY

HLA Footprints on Human Immunodeficiency Virus Type 1 Are Associated with Interclade Polymorphisms and Intraclade Phylogenetic Clustering

(2009) P. C. Matthews et al.   JOURNAL OF VIROLOGY

Adaptation of HIV-1 to human leukocyte antigen class I

(2009) Yuka Kawashima et al.   NATURE

A Nonprogressive Clinical Course in HIV‐Infected Individuals Expressing Human Leukocyte Antigen B57/5801 Is Associated with Preserved CD8+T Lymphocyte Responsiveness to the HW9 Epitope in Nef

(2008) Marjon Navis et al.   JOURNAL OF INFECTIOUS DISEASES

Human Immunodeficiency Virus-Specific Gamma Interferon Enzyme-Linked Immunospot Assay Responses Targeting Specific Regions of the Proteome during Primary Subtype C Infection Are Poor Predictors of the Course of Viremia and Set Point

(2008) C. M. Gray et al.   JOURNAL OF VIROLOGY

Genetic Characterization of Human Immunodeficiency Virus Type 1 in Elite Controllers: Lack of Gross Genetic Defects or Common Amino Acid Changes

(2008) T. Miura et al.   JOURNAL OF VIROLOGY

Evidence of CD8+ T-Cell-Mediated Selective Pressure on Human Immunodeficiency Virus Type 1 nef in HLA-B*57+ Elite Suppressors

(2008) J. R. Bailey et al.   JOURNAL OF VIROLOGY

Protective HLA Class I Alleles That Restrict Acute-Phase CD8+ T-Cell Responses Are Associated with Viral Escape Mutations Located in Highly Conserved Regions of Human Immunodeficiency Virus Type 1

(2008) Y. E. Wang et al.   JOURNAL OF VIROLOGY

Marked Epitope- and Allele-Specific Differences in Rates of Mutation in Human Immunodeficiency Type 1 (HIV-1) Gag, Pol, and Nef Cytotoxic T-Lymphocyte Epitopes in Acute/Early HIV-1 Infection

(2008) Z. L. Brumme et al.   JOURNAL OF VIROLOGY

Central Role of Reverting Mutations in HLA Associations with Human Immunodeficiency Virus Set Point

(2008) P. C. Matthews et al.   JOURNAL OF VIROLOGY

One-Pot, Mix-and-Read Peptide-MHC Tetramers

(2008) Christian Leisner et al.   PLoS One

HIV-1 Nef: at the crossroads

(2008) John L Foster et al.   Retrovirology

The Mamu B⁎17-restricted SIV Nef IW9 to TW9 mutation abrogates correct epitope processing and presentation without loss of replicative fitness

(2008) Jacob T. Minang et al.   VIROLOGY

Phylogenetic Dependency Networks: Inferring Patterns of CTL Escape and Codon Covariation in HIV-1 Gag

(2008) Jonathan M. Carlson et al.   PLoS Computational Biology