4.6 Article

Genetic Polymorphism of Human Y Chromosome and Risk Factors for Cardiovascular Diseases: A Study in WOBASZ Cohort

期刊

PLOS ONE
卷 8, 期 7, 页码 -

出版社

PUBLIC LIBRARY SCIENCE
DOI: 10.1371/journal.pone.0068155

关键词

-

资金

  1. Ministry of Science and Higher Education [N404 032 31/1892]

向作者/读者索取更多资源

Genetic variants of Y chromosome predispose to hypertension in rodents, whereas in humans the evidence is conflicting. Our purpose was to study the distribution of a panel of Y chromosome markers in a cohort from a cross-sectional population-based study on the prevalence of cardiovascular risk factors in Poland (WOBASZ study). The HindIII, YAP Y chromosome variants, previously shown to influence blood pressure, lipid traits or height, as well as SNPs defining main Y chromosome haplogroups, were typed in 3026, 2783 and 2652 samples, respectively. In addition, 4 subgroups (N similar to 100 each) representing extremes of LDL concentration or blood pressure (BP) were typed for a panel of 17 STRs. The HindIII and YAP polymorphism were not associated with any of the studied traits. Analysis of the haplogroup distribution showed an association between higher HDL level and hg I-M170 (P = 0.02), higher LDL level and hg F*(xl-M170, J2-M172, K-M9) (P = 0.03) and lower BMI and hg N3-Tat (P = 0.04). Analysis of STRs did not show statistically significant differences. Since all these associations lost statistical significance after Bonferroni correction, we conclude that a major role of Y chromosome genetic variation (defined by HindIII, YAP or main Y chromosome haplogroups) in determining cardiovascular risk in Poles is unlikely.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.6
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Anatomy & Morphology

Standard clinical computed tomography fails to precisely visualise presence, course and branching points of deep cerebral perforators

R. Rzeplinski, M. Slugocki, M. Kwiatkowska, S. Tarka, M. Tomaszewski, M. Kucewicz, K. Karczewski, P. Krajewski, J. Malachowski, B. Ciszek

Summary: The aim of this study was to assess the ability of standard CT images to visualize perforating arteries and compare it with microscopic and micro-CT pictures. The results showed that standard CT failed to clearly visualize branching points and vessels smaller than 0.25-0.5 mm in diameter. Therefore, compared to micro-CT, CT has quantitative and qualitative flaws in imaging perforating arteries.

FOLIA MORPHOLOGICA (2023)

Review Biotechnology & Applied Microbiology

Genetic diversity in Kashubs: the regional increase in the frequency of several disease-causing variants

Maciej Jankowski, Patrycja Daca-Roszak, Cezary Obracht-Prondzynski, Rafal Ploski, Beata S. Lipska-Zietkiewicz, Ewa Zietkiewicz

Summary: The frequency distribution of genetic variants among human populations is influenced by genetic drift in isolated populations, historical migrations, and demography. Identical by descent variants can lead to the increased prevalence of pathogenic diseases if they are pathogenic in nature. Studying the increased regional prevalence of pathogenic variants can provide insights into historical processes and aid in personalized medicine. This article discusses the genetic diversity in the Kashub minority group in northern Poland, focusing on the biased distribution of disease-causing variants.

JOURNAL OF APPLIED GENETICS (2022)

Article Biochemistry & Molecular Biology

Identification of novel susceptibility genes for non-syndromic cleft lip with or without cleft palate using NGS-based multigene panel testing

Justyna Dabrowska, Barbara Biedziak, Anna Szponar-Zurowska, Margareta Budner, Pawel P. Jagodzinski, Rafal Ploski, Adrianna Mostowska

Summary: This study investigates the potential role of rare and private variants in the risk of non-syndromic cleft lip with or without cleft palate (ns-CL/P). The results indicate that rare coding variants may contribute to the genetic architecture of ns-CL/P. Additionally, the study suggests a common genetic link between orofacial clefts and dental abnormalities.

MOLECULAR GENETICS AND GENOMICS (2022)

Article Genetics & Heredity

Prenatal Diagnosis of Jeune Syndrome Caused by Compound Heterozygous Variants in DYNC2H1 Gene-Case Report with Rapid WES Procedure and Differential Diagnosis of Lethal Skeletal Dysplasias

Agnieszka Stembalska, Malgorzata Rydzanicz, Magdalena Klaniewska, Lech Dudarewicz, Agnieszka Pollak, Mateusz Biela, Piotr Stawinski, Rafal Ploski, Robert Smigiel

Summary: Skeletal dysplasias are a heterogeneous group of genetic disorders that affect bone and cartilage development. Prenatal diagnosis and genetic consultation are important for prognosis and management.
Article Genetics & Heredity

Identification of New Copy Number Variation and the Evaluation of a CNV Detection Tool for NGS Panel Data in Polish Familial Hypercholesterolemia Patients

Lena Rutkowska, Iwona Pinkier, Kinga Salacinska, Lukasz Kepczynski, Dominik Salachna, Joanna Lewek, Maciej Banach, Pawel Matusik, Ewa Starostecka, Andrzej Lewinski, Rafal Ploski, Piotr Stawinski, Agnieszka Gach

Summary: The aim of this study was to identify novel CNV changes in FH patients using targeted sequencing and evaluate the suitability of the DECoN tool for CNV calling. The results suggest that the NGS-based approach has the potential to identify large-scale variations in the LDLR gene, but MLPA confirmation is still necessary.
Article Genetics & Heredity

Identification of a new familial case of 3q29 deletion syndrome associated with cleft lip and palate via whole-exome sequencing

Barbara Biedziak, Justyna Dabrowska, Anna Szponar-Zurowska, Ewelina Bukowska-Olech, Aleksander Jamsheer, Ewa Mojs, Jennifer Mulle, Rafal Ploski, Adrianna Mostowska

Summary: This study identified a family with a recurrent 3q29 deletion, which is associated with orofacial clefts. The results suggest that the 3q29 deletion may be the primary risk factor for orofacial clefts, with additional genomic variants, methylation changes, or environmental exposure serving as modifiers of this risk.

AMERICAN JOURNAL OF MEDICAL GENETICS PART A (2023)

Article Biochemistry & Molecular Biology

Allogenic Adipose-Derived Stem Cells in Diabetic Foot Ulcer Treatment: Clinical Effectiveness, Safety, Survival in the Wound Site, and Proteomic Impact

Beata Mrozikiewicz-Rakowska, Ilona Szablowska-Gadomska, Dominik Cysewski, Stefan Rudzinski, Rafal Ploski, Piotr Gasperowicz, Magdalena Konarzewska, Jakub Zielinski, Mateusz Mieczkowski, Damian Sienko, Tomasz Grzela, Maria Noszczyk, Barbara Paleska, Leszek Czupryniak, Malgorzata Lewandowska-Szumiel

Summary: This study examined the safety and efficacy of allogenic adipose-derived stem cells (ADSCs) in diabetic foot ulcer treatment. The results showed that patients treated with ADSCs had faster wound healing and smaller wound size, which correlated with molecular changes. These findings have important implications for the development of cell-based therapies.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2023)

Article Multidisciplinary Sciences

Non-allergic eye rubbing is a major behavioral risk factor for keratoconus

Katarzyna Jaskiewicz, Magdalena Maleszka-Kurpiel, Andrzej Michalski, Rafal Ploski, Malgorzata Rydzanicz, Marzena Gajecka

Summary: This study identified male sex, eye rubbing, time of using a computer after work, and dust in the working environment as substantial risk factors for keratoconus, which affect the corneal epithelium. Gene expression analysis showed that eye rubbing may cause cellular stress and affect the phenotype of keratoconus.

PLOS ONE (2023)

Article Genetics & Heredity

Expanding the Knowledge of KIF1A-Dependent Disorders to a Group of Polish Patients

Justyna Paprocka, Aleksandra Jezela-Stanek, Robert Smigiel, Anna Walczak, Hanna Mierzewska, Anna Kutkowska-Kazmierczak, Rafal Ploski, Ewa Emich-Widera, Barbara Steinborn

Summary: This study analyzed the first Polish patients with confirmed heterozygous pathogenic and potentially pathogenic KIF1A variants. Three novel variants were identified. The authors highlighted the difficulties in classifying particular syndromes due to non-specific and overlapping signs and symptoms, sometimes observed only temporarily.
Review Medicine, General & Internal

DCDC2-Related Ciliopathy: Report of Six Polish Patients, Novel DCDC2 Variant, and Literature Review of Reported Cases

Patryk Lipinski, Elzbieta Ciara, Dorota Jurkiewicz, Magda Mekrouda, Joanna Cielecka-Kuszyk, Elzbieta Jurkiewicz, Rafal Ploski, Joanna Pawlowska, Irena Jankowska

Summary: This study presents the clinical, pathological and molecular report of six patients with DCDC2 biallelic pathogenic variants. All patients presented with cholestatic jaundice and elevated GGT, and one patient also had features of renal disease. Three different variants in the DCDC2 gene were identified. The main clinical presentation of DCDC2-related ciliopathy was neonatal sclerosing cholangitis.

DIAGNOSTICS (2023)

Article Genetics & Heredity

A novel non-recurrent CNV deletion involving TBX4 and leaving TBX2 intact causes congenital alveolar dysplasia

Katarzyna Bzdega, Mateusz Biela, Gail H. Deutsch, Joseph A. Kitzmiller, Malgorzata Rydzanicz, Rafal Ploski, Jeffrey A. Whitsett, Robert Smigiel, Justyna A. Karolak

Summary: Congenital alveolar dysplasia (CAD) is a rare and lethal lung developmental disorder characterized by respiratory failure and pulmonary arterial hypertension. Most CAD cases are associated with copy-number variant (CNV) deletions at 17q23.1q23.2 or 5p12. This study reports a novel non-recurrent CNV deletion involving TBX4 gene in a CAD patient, providing evidence that perturbations in TBX4, rather than TBX2, cause severe lung phenotypes in humans.

CLINICAL GENETICS (2023)

Article Biochemistry & Molecular Biology

A Machine-Learning-Based Approach to Prediction of Biogeographic Ancestry within Europe

Anna Kloska, Agata Gielczyk, Tomasz Grzybowski, Rafal Ploski, Sylwester M. Kloska, Tomasz Marciniak, Krzysztof Palczynski, Urszula Rogalla-Ladniak, Boris A. Malyarchuk, Miroslava V. Derenko, Natasa Kovacevic-Grujicic, Milena Stevanovic, Danijela Drakulic, Slobodan Davidovic, Magdalena Spolnicka, Magdalena Zubanska, Marcin Wozniak

Summary: Data obtained through massive parallel sequencing can be useful in population genetics studies. Machine learning techniques were used in this study to classify DNA samples from Slavic and non-Slavic individuals, with the aim of discerning the genetic provenance of individuals of Slavic descent.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2023)

Article Genetics & Heredity

Double Heterozygous Pathogenic Variants in the LOX and PKD1 Genes in a 5-Year-Old Patient with Thoracic Aortic Aneurysm and Polycystic Kidney Disease

Joanna Kinga Poninska, Weronika Pelczar-Plachta, Agnieszka Pollak, Katarzyna Jonczyk-Potoczna, Grazyna Truszkowska, Ilona Michalowska, Emilia Szafran, Zofia T. Bilinska, Waldemar Bobkowski, Rafal Ploski

Summary: Familial thoracic aortic aneurysms and dissections in pediatric patients are extremely rare, and there is limited knowledge about the pathogenic variants. This case report presents a 5.5-year-old girl with early-onset aortic aneurysm and concomitant polycystic kidney disease. Whole exome sequencing and family screening identified the presence of two pathogenic variants in the LOX and PKD1 genes in the patient.
Article Endocrinology & Metabolism

Effects of maternal type 1 diabetes and confounding factors on neonatal microbiomes

Marzena Gajecka, Pawel Gutaj, Katarzyna Jaskiewicz, Malgorzata Rydzanicz, Tomasz Szczapa, Dorota Kaminska, Grzegorz Kosewski, Juliusz Przyslawski, Rafal Ploski, Ewa Wender-Ozegowska

Summary: This study quantitatively and functionally examined the microbiota in maternal-neonatal dyads from gravidae with type 1 diabetes and explored the impact of pregnancy-specific factors on the microbiomes. It found that type 1 diabetes and certain confounding factors can influence the neonatal microbiomes.

DIABETOLOGIA (2023)

暂无数据