Pyrosequencing-Based Assessment of the Bacteria Diversity in Surface and Subsurface Peat Layers of a Northern Wetland, with Focus on Poorly Studied Phyla and Candidate Divisions

Microbial Community Structure and Activity Linked to Contrasting Biogeochemical Gradients in Bog and Fen Environments of the Glacial Lake Agassiz Peatland

(2012) X. Lin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Analysis of Structure and Composition of Bacterial Core Communities in Mature Drinking Water Biofilms and Bulk Water of a Citywide Network in Germany

(2012) Karsten Henne et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biogeography of bacterial communities exposed to progressive long-term environmental change

(2012) Ramiro Logares et al.   ISME Journal

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Abundance, Diversity, and Depth Distribution of Planctomycetes in Acidic Northern Wetlands

(2012) Anastasia O. Ivanova et al.   Frontiers in Microbiology

Sulfate-reducing microorganisms in wetlands – fameless actors in carbon cycling and climate change

(2012) Michael Pester   Frontiers in Microbiology

Similar Diversity of Alphaproteobacteria and Nitrogenase Gene Amplicons on Two Related Sphagnum Mosses

(2012) Anastasia Bragina et al.   Frontiers in Microbiology

Telmatocola sphagniphila gen. nov., sp. nov., a Novel Dendriform Planctomycete from Northern Wetlands

(2012) Irina S. Kulichevskaya et al.   Frontiers in Microbiology

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Bacterial populations and environmental factors controlling cellulose degradation in an acidic Sphagnum peat

(2011) Timofey A. Pankratov et al.   ENVIRONMENTAL MICROBIOLOGY

Telmatobacter bradus gen. nov., sp. nov., a cellulolytic facultative anaerobe from subdivision 1 of the Acidobacteria, and emended description of Acidobacterium capsulatum Kishimoto et al. 1991

(2011) T. A. Pankratov et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Granulicella arctica sp. nov., Granulicella mallensis sp. nov., Granulicella tundricola sp. nov. and Granulicella sapmiensis sp. nov., novel acidobacteria from tundra soil

(2011) M. K. Mannisto et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Sphagnum mosses harbour highly specific bacterial diversity during their whole lifecycle

(2011) Anastasia Bragina et al.   ISME Journal

Bacterial Diversity in Solenopsis invicta and Solenopsis geminata Ant Colonies Characterized by 16S amplicon 454 Pyrosequencing

(2011) Heather D. Ishak et al.   MICROBIAL ECOLOGY

Bacterial community structures are unique and resilient in full-scale bioenergy systems

(2011) J. J. Werner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cultivating Uncultured Bacteria from Northern Wetlands: Knowledge Gained and Remaining Gaps

(2011) Svetlana N. Dedysh   Frontiers in Microbiology

New Anaerobic, Ammonium-Oxidizing Community Enriched from Peat Soil

(2010) Bao-lan Hu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Granulicella paludicola gen. nov., sp. nov., Granulicella pectinivorans sp. nov., Granulicella aggregans sp. nov. and Granulicella rosea sp. nov., acidophilic, polymer-degrading acidobacteria from Sphagnum peat bogs

(2010) T. A. Pankratov et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Global prevalence of methane oxidation by symbiotic bacteria in peat-moss ecosystems

(2010) Nardy Kip et al.   Nature Geoscience

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Bacterial, archaeal and eukaryotic diversity of smooth and pustular microbial mat communities in the hypersaline lagoon of Shark Bay

(2009) M. A. ALLEN et al.   Geobiology

Bryobacter aggregatus gen. nov., sp. nov., a peat-inhabiting, aerobic chemo-organotroph from subdivision 3 of the Acidobacteria

(2009) I. S. Kulichevskaya et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data

(2009) Micah Hamady et al.   ISME Journal

Analysis of the diversity of diazotrophic bacteria in peat soil by cloning of the nifH gene

(2009) E. V. Zadorina et al.   MICROBIOLOGY

Exploring methanotroph diversity in acidic northern wetlands: Molecular and cultivation-based studies

(2009) S. N. Dedysh   MICROBIOLOGY

Differences in the activity and bacterial community structure of drained grassland and forest peat soils

(2009) Luka Ausec et al.   SOIL BIOLOGY & BIOCHEMISTRY

Environmental, genomic and taxonomic perspectives on methanotrophicVerrucomicrobia

(2009) Huub J. M. Op den Camp et al.   Environmental Microbiology Reports

Microaerobic and anaerobic metabolism of aMethylocystis parvusstrain isolated from a denitrifying bioreactor

(2009) Margarita Vecherskaya et al.   Environmental Microbiology Reports

Diversity of the active methanotrophic community in acidic peatlands as assessed by mRNA and SIP-PLFA analyses

(2008) Yin Chen et al.   ENVIRONMENTAL MICROBIOLOGY

Environmental and anthropogenic controls over bacterial communities in wetland soils

(2008) W. H. Hartman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA