Simultaneous RNA-Seq Analysis of a Mixed Transcriptome of Rice and Blast Fungus Interaction

Effector-Mediated Suppression of Chitin-Triggered Immunity by Magnaporthe oryzae Is Necessary for Rice Blast Disease

(2012) T. A. Mentlak et al.   PLANT CELL

Genome-wide Transcriptional Profiling of Appressorium Development by the Rice Blast Fungus Magnaporthe oryzae

(2012) Darren M. Soanes et al.   PLoS Pathogens

Transcriptome profiling of the rice blast fungus during invasive plant infection and in vitro stresses

(2011) Sandra M Mathioni et al.   BMC GENOMICS

Comparative Secretome Investigation ofMagnaporthe oryzaeProteins Responsive to Nitrogen Starvation

(2011) Yiming Wang et al.   JOURNAL OF PROTEOME RESEARCH

Reorganizing the protein space at the Universal Protein Resource (UniProt)

(2011)   NUCLEIC ACIDS RESEARCH

NCBI Reference Sequences (RefSeq): current status, new features and genome annotation policy

(2011) K. D. Pruitt et al.   NUCLEIC ACIDS RESEARCH

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Innate immunity in rice

(2011) Xuewei Chen et al.   TRENDS IN PLANT SCIENCE

Identification and analysis of in planta expressed genes of Magnaporthe oryzae

(2010) Soonok Kim et al.   BMC GENOMICS

Recent advances in rice blast effector research

(2010) Barbara Valent et al.   CURRENT OPINION IN PLANT BIOLOGY

Phytoalexin Accumulation in the Interaction Between Rice and the Blast Fungus

(2010) Morifumi Hasegawa et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

A rice fungal MAMP-responsive MAPK cascade regulates metabolic flow to antimicrobial metabolite synthesis

(2010) Mitsuko Kishi-Kaboshi et al.   PLANT JOURNAL

Conserved Fungal LysM Effector Ecp6 Prevents Chitin-Triggered Immunity in Plants

(2010) R. de Jonge et al.   SCIENCE

WRKY transcription factors

(2010) Paul J. Rushton et al.   TRENDS IN PLANT SCIENCE

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

Estimating accuracy of RNA-Seq and microarrays with proteomics

(2009) Xing Fu et al.   BMC GENOMICS

The transcription factor OsNAC4 is a key positive regulator of plant hypersensitive cell death

(2009) Takashi Kaneda et al.   EMBO JOURNAL

Genome-wide validation ofMagnaporthe griseagene structures based on transcription evidence

(2009) Hisataka Numa et al.   FEBS LETTERS

Protease Inhibitors from Plants with Antimicrobial Activity

(2009) Jin-Young Kim et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Under pressure: investigating the biology of plant infection by Magnaporthe oryzae

(2009) Richard A. Wilson et al.   NATURE REVIEWS MICROBIOLOGY

Interaction Transcriptome Analysis Identifies Magnaporthe oryzae BAS1-4 as Biotrophy-Associated Secreted Proteins in Rice Blast Disease

(2009) G. Mosquera et al.   PLANT CELL

Differential responses of rice to inoculation with wild-type and non-pathogenic mutants of Magnaporthe oryzae

(2009) Tomoaki Kato et al.   PLANT MOLECULAR BIOLOGY

Against the grain: safeguarding rice from rice blast disease

(2009) Pari Skamnioti et al.   TRENDS IN BIOTECHNOLOGY

Fungal LysM effectors: extinguishers of host immunity?

(2009) Ronnie de Jonge et al.   TRENDS IN MICROBIOLOGY

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Three Microbial Strategies for Plant Cell Wall Degradation

(2008) David B. Wilson   Annals of the New York Academy of Sciences

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Plant pathogenesis-related (PR) proteins: A focus on PR peptides

(2008) Jan Sels et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Transcriptome analysis reveals new insight into appressorium formation and function in the rice blast fungus Magnaporthe oryzae

(2008) Yeonyee Oh et al.   GENOME BIOLOGY