Semi-Automatic In Silico Gap Closure Enabled De Novo Assembly of Two Dehalobacter Genomes from Metagenomic Data
出版年份 2012 全文链接
标题
Semi-Automatic In Silico Gap Closure Enabled De Novo Assembly of Two Dehalobacter Genomes from Metagenomic Data
作者
关键词
-
出版物
PLoS One
Volume 7, Issue 12, Pages e52038
出版商
Public Library of Science (PLoS)
发表日期
2012-12-22
DOI
10.1371/journal.pone.0052038
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota
- (2012) V. Iverson et al. SCIENCE
- Toward almost closed genomes with GapFiller
- (2012) Marten Boetzer et al. GENOME BIOLOGY
- Meta-IDBA: a de Novo assembler for metagenomic data
- (2011) Y. Peng et al. BIOINFORMATICS
- Bambus 2: scaffolding metagenomes
- (2011) Sergey Koren et al. BIOINFORMATICS
- Genovo: De Novo Assembly for Metagenomes
- (2011) Jonathan Laserson et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Complete genome sequence of Bacteroides salanitronis type strain (BL78T)
- (2011) Sabine Gronow et al. Standards in Genomic Sciences
- Scaffolding pre-assembled contigs using SSPACE
- (2010) Marten Boetzer et al. BIOINFORMATICS
- Assembly complexity of prokaryotic genomes using short reads
- (2010) Carl Kingsford et al. BMC BIOINFORMATICS
- Chloroform respiration to dichloromethane by a Dehalobacter population
- (2010) Ariel Grostern et al. ENVIRONMENTAL MICROBIOLOGY
- Nitrite-driven anaerobic methane oxidation by oxygenic bacteria
- (2010) Katharina F. Ettwig et al. NATURE
- Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps
- (2010) Isheng J Tsai et al. GENOME BIOLOGY
- ABACAS: algorithm-based automatic contiguation of assembled sequences
- (2009) S. Assefa et al. BIOINFORMATICS
- ABySS: A parallel assembler for short read sequence data
- (2009) J. T. Simpson et al. GENOME RESEARCH
- Genome Project Standards in a New Era of Sequencing
- (2009) P. S. G. Chain et al. SCIENCE
- EagleView: A genome assembly viewer for next-generation sequencing technologies
- (2008) W. Huang et al. GENOME RESEARCH
- ALLPATHS: De novo assembly of whole-genome shotgun microreads
- (2008) J. Butler et al. GENOME RESEARCH
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- Population Genomic Analysis of Strain Variation in Leptospirillum Group II Bacteria Involved in Acid Mine Drainage Formation
- (2008) Sheri L Simmons et al. PLOS BIOLOGY
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started