Prediction of Altered 3′- UTR miRNA-Binding Sites from RNA-Seq Data: The Swine Leukocyte Antigen Complex (SLA) as a Model Region
出版年份 2012 全文链接
标题
Prediction of Altered 3′- UTR miRNA-Binding Sites from RNA-Seq Data: The Swine Leukocyte Antigen Complex (SLA) as a Model Region
作者
关键词
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出版物
PLoS One
Volume 7, Issue 11, Pages e48607
出版商
Public Library of Science (PLoS)
发表日期
2012-11-07
DOI
10.1371/journal.pone.0048607
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- MicroRNAs in Stress Signaling and Human Disease
- (2012) Joshua T. Mendell et al. CELL
- Pig Bone Marrow-Derived Macrophages Resemble Human Macrophages in Their Response to Bacterial Lipopolysaccharide
- (2012) R. Kapetanovic et al. JOURNAL OF IMMUNOLOGY
- An alternative mode of microRNA target recognition
- (2012) Sung Wook Chi et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Fast Computation and Applications of Genome Mappability
- (2012) Thomas Derrien et al. PLoS One
- Catalog of MicroRNA Seed Polymorphisms in Vertebrates
- (2012) Minja Zorc et al. PLoS One
- Solexa Sequencing Identification of Conserved and Novel microRNAs in Backfat of Large White and Chinese Meishan Pigs
- (2012) Chen Chen et al. PLoS One
- The Molecular Origin and Consequences of Escape from miRNA Regulation by HLA-C Alleles
- (2011) Colm O'hUigin et al. AMERICAN JOURNAL OF HUMAN GENETICS
- A global view of porcine transcriptome in three tissues from a full-sib pair with extreme phenotypes in growth and fat deposition by paired-end RNA sequencing
- (2011) Congying Chen et al. BMC GENOMICS
- Differential microRNA regulation of HLA-C expression and its association with HIV control
- (2011) Smita Kulkarni et al. NATURE
- Evolution of microRNA diversity and regulation in animals
- (2011) Eugene Berezikov NATURE REVIEWS GENETICS
- A Parsimonious Model for Gene Regulation by miRNAs
- (2011) S. Djuranovic et al. SCIENCE
- TargetSpy: a supervised machine learning approach for microRNA target prediction
- (2010) Martin Sturm et al. BMC BIOINFORMATICS
- Whole blood-derived miRNA profiles as potential new tools for ovarian cancer screening
- (2010) S F M Häusler et al. BRITISH JOURNAL OF CANCER
- MicroRNA Functions in Stress Responses
- (2010) Anthony K.L. Leung et al. MOLECULAR CELL
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Efficient use of accessibility in microRNA target prediction
- (2010) Ray M. Marín et al. NUCLEIC ACIDS RESEARCH
- BRAT: bisulfite-treated reads analysis tool
- (2009) Elena Y. Harris et al. BIOINFORMATICS
- Lost in translation: an assessment and perspective for computational microRNA target identification
- (2009) Panagiotis Alexiou et al. BIOINFORMATICS
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- MicroRNA Control in the Immune System: Basic Principles
- (2009) Changchun Xiao et al. CELL
- MicroRNAs: Target Recognition and Regulatory Functions
- (2009) David P. Bartel CELL
- Revisiting the principles of microRNA target recognition and mode of action
- (2009) Peter Brodersen et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Patrocles: a database of polymorphic miRNA-mediated gene regulation in vertebrates
- (2009) Samuel Hiard et al. NUCLEIC ACIDS RESEARCH
- Design of a High Density SNP Genotyping Assay in the Pig Using SNPs Identified and Characterized by Next Generation Sequencing Technology
- (2009) Antonio M. Ramos et al. PLoS One
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Molecular genetics of the swine major histocompatibility complex, the SLA complex
- (2008) Joan K. Lunney et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- Most mammalian mRNAs are conserved targets of microRNAs
- (2008) R. C. Friedman et al. GENOME RESEARCH
- Widespread changes in protein synthesis induced by microRNAs
- (2008) Matthias Selbach et al. NATURE
- NCBI Reference Sequences: current status, policy and new initiatives
- (2008) K. D. Pruitt et al. NUCLEIC ACIDS RESEARCH
- Experimental validation of miRNA targets
- (2007) Donald E. Kuhn et al. METHODS
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