The Fecal Microbiome in Dogs with Acute Diarrhea and Idiopathic Inflammatory Bowel Disease

Effect of the proton pump inhibitor omeprazole on the gastrointestinal bacterial microbiota of healthy dogs

(2012) Jose F. Garcia-Mazcorro et al.   FEMS MICROBIOLOGY ECOLOGY

16S rRNA Gene Pyrosequencing Reveals Bacterial Dysbiosis in the Duodenum of Dogs with Idiopathic Inflammatory Bowel Disease

(2012) Jan S. Suchodolski et al.   PLoS One

Abundance and short-term temporal variability of fecal microbiota in healthy dogs

(2012) Jose F. Garcia-Mazcorro et al.   MicrobiologyOpen

High-dimensional bolstered error estimation

(2011) C. Sima et al.   BIOINFORMATICS

Classification of Diet-Modulated Gene Signatures at the Colon Cancer Initiation and Progression Stages

(2011) Priyanka Kachroo et al.   DIGESTIVE DISEASES AND SCIENCES

Massive parallel 16S rRNA gene pyrosequencing reveals highly diverse fecal bacterial and fungal communities in healthy dogs and cats

(2011) Stefanie Handl et al.   FEMS MICROBIOLOGY ECOLOGY

Treatment of Aseptic Dogs with Hemorrhagic Gastroenteritis with Amoxicillin/Clavulanic Acid: A Prospective Blinded Study

(2011) S. Unterer et al.   JOURNAL OF VETERINARY INTERNAL MEDICINE

Enteropathogenic Bacteria in Dogs and Cats: Diagnosis, Epidemiology, Treatment, and Control

(2011) S.L. Marks et al.   JOURNAL OF VETERINARY INTERNAL MEDICINE

A Molecular Enrichment Strategy Based on cpn60 for Detection of Epsilon-Proteobacteria in the Dog Fecal Microbiome

(2011) Bonnie Chaban et al.   MICROBIAL ECOLOGY

Enterotypes of the human gut microbiome

(2011) Manimozhiyan Arumugam et al.   NATURE

Linking Long-Term Dietary Patterns with Gut Microbial Enterotypes

(2011) G. D. Wu et al.   SCIENCE

Pitfalls and Progress in the Diagnosis and Management of Canine Inflammatory Bowel Disease

(2011) Kenneth W. Simpson et al.   VETERINARY CLINICS OF NORTH AMERICA-SMALL ANIMAL PRACTICE

Bacterial Enteritis in Dogs and Cats: Diagnosis, Therapy, and Zoonotic Potential

(2011) J. Scott Weese   VETERINARY CLINICS OF NORTH AMERICA-SMALL ANIMAL PRACTICE

Noninvasive stool-based detection of infant gastrointestinal development using gene expression profiles from exfoliated epithelial cells

(2010) Robert S. Chapkin et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Real-Time Multiplex Polymerase Chain Reaction Assay for Rapid Detection of Clostridium difficile Toxin-Encoding Strains

(2010) Beth A. Houser et al.   Foodborne Pathogens and Disease

COMPANION ANIMALS SYMPOSIUM: Microbes and gastrointestinal health of dogs and cats1

(2010) J. S. Suchodolski   JOURNAL OF ANIMAL SCIENCE

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Evaluation of mucosal bacteria and histopathology, clinical disease activity and expression of Toll-like receptors in German shepherd dogs with chronic enteropathies

(2010) K. Allenspach et al.   VETERINARY MICROBIOLOGY

Characterization of fecal microbiota in cats using universal 16S rRNA gene and group-specific primers for Lactobacillus and Bifidobacterium spp.

(2010) Lauren E. Ritchie et al.   VETERINARY MICROBIOLOGY

The effect of the macrolide antibiotic tylosin on microbial diversity in the canine small intestine as demonstrated by massive parallel 16S rRNA gene sequencing

(2009) Jan S Suchodolski et al.   BMC MICROBIOLOGY

Commensal bacteria, traditional and opportunistic pathogens, dysbiosis and bacterial killing in inflammatory bowel diseases

(2009) Christopher D Packey et al.   CURRENT OPINION IN INFECTIOUS DISEASES

Investigation of  the faecal microbiota associated with canine chronic diarrhoea

(2009) Jie Jia et al.   FEMS MICROBIOLOGY ECOLOGY

Low counts of Faecalibacterium prausnitzii in colitis microbiota

(2009) H. Sokol et al.   INFLAMMATORY BOWEL DISEASES

The bacterial signal indole increases epithelial-cell tight-junction resistance and attenuates indicators of inflammation

(2009) T. Bansal et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular analysis of the bacterial microbiota in duodenal biopsies from dogs with idiopathic inflammatory bowel disease

(2009) Jan S. Suchodolski et al.   VETERINARY MICROBIOLOGY

Analysis of bacterial diversity in the canine duodenum, jejunum, ileum, and colon by comparative 16S rRNA gene analysis

(2008) Jan S. Suchodolski et al.   FEMS MICROBIOLOGY ECOLOGY

Assessment of microbial diversity along the feline intestinal tract using 16S rRNA gene analysis

(2008) Lauren E. Ritchie et al.   FEMS MICROBIOLOGY ECOLOGY

Molecular-phylogenetic characterization of microbial communities imbalances in the small intestine of dogs with inflammatory bowel disease

(2008) Panagiotis G. Xenoulis et al.   FEMS MICROBIOLOGY ECOLOGY

Improved group-specific PCR primers for denaturing gradient gel electrophoresis analysis of the genetic diversity of complex microbial communities

(2008) Martin Mühling et al.   ISME Journal

Dietary protein concentration affects intestinal microbiota of adult cats: a study using DGGE and qPCR to evaluate differences in microbial populations in the feline gastrointestinal tract

(2008) D. C. Lubbs et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients

(2008) H. Sokol et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Prevalence and identification of fungal DNA in the small intestine of healthy dogs and dogs with chronic enteropathies

(2008) Jan S. Suchodolski et al.   VETERINARY MICROBIOLOGY

Real-time multiplex PCR assay for rapid detection and toxintyping of Clostridium perfringens toxin producing strains in feces of dairy cattle

(2007) A.A. Gurjar et al.   MOLECULAR AND CELLULAR PROBES