mRNA-Seq Analysis of the Pseudoperonospora cubensis Transcriptome During Cucumber (Cucumis sativus L.) Infection

Endogenous peptide elicitors in higher plants

(2011) Yube Yamaguchi et al.   CURRENT OPINION IN PLANT BIOLOGY

454-pyrosequencing of Coffea arabica leaves infected by the rust fungus Hemileia vastatrix reveals in planta-expressed pathogen-secreted proteins and plant functions in a late compatible plant-rust interaction

(2011) DIANA FERNANDEZ et al.   MOLECULAR PLANT PATHOLOGY

Melampsora larici-populina Transcript Profiling During Germination and Timecourse Infection of Poplar Leaves Reveals Dynamic Expression Patterns Associated with Virulence and Biotrophy

(2011) Sébastien Duplessis et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

454 Genome Sequencing ofPseudoperonospora cubensisReveals Effector Proteins with a QXLR Translocation Motif

(2011) Miaoying Tian et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Identification of Hyaloperonospora arabidopsidis Transcript Sequences Expressed during Infection Reveals Isolate-Specific Effectors

(2011) Adriana Cabral et al.   PLoS One

Gene Coexpression Network Analysis as a Source of Functional Annotation for Rice Genes

(2011) Kevin L. Childs et al.   PLoS One

Multiple Candidate Effectors from the Oomycete Pathogen Hyaloperonospora arabidopsidis Suppress Host Plant Immunity

(2011) Georgina Fabro et al.   PLoS Pathogens

Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

(2010) James H Bullard et al.   BMC BIOINFORMATICS

Comparative analysis of secreted protein evolution using expressed sequence tags from four poplar leaf rusts (Melampsora spp.)

(2010) David L Joly et al.   BMC GENOMICS

The kinome of Phytophthora infestans reveals oomycete-specific innovations and links to other taxonomic groups

(2010) Howard S Judelson et al.   BMC GENOMICS

The CAZyome of Phytophthora spp.: A comprehensive analysis of the gene complement coding for carbohydrate-active enzymes in species of the genus Phytophthora

(2010) Manuel D Ospina-Giraldo et al.   BMC GENOMICS

Cucurbit downy mildew (Pseudoperonospora cubensis)—biology, ecology, epidemiology, host-pathogen interaction and control

(2010) Aleš Lebeda et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Phylogenetic investigations in the genus Pseudoperonospora reveal overlooked species and cryptic diversity in the P. cubensis species cluster

(2010) Fabian Runge et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

The cucurbit downy mildew pathogen Pseudoperonospora cubensis

(2010) ELIZABETH A. SAVORY et al.   MOLECULAR PLANT PATHOLOGY

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Discovery of Phytophthora infestans Genes Expressed in Planta through Mining of cDNA Libraries

(2010) Roberto Sierra et al.   PLoS One

Ancient class of translocated oomycete effectors targets the host nucleus

(2010) S. Schornack et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Signatures of Adaptation to Obligate Biotrophy in the Hyaloperonospora arabidopsidis Genome

(2010) L. Baxter et al.   SCIENCE

Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

(2010) C André Lévesque et al.   GENOME BIOLOGY

The PsCZF1 gene encoding a C2H2 zinc finger protein is required for growth, development and pathogenesis in Phytophthora sojae

(2009) Yonglin Wang et al.   MICROBIAL PATHOGENESIS

Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans

(2009) Brian J. Haas et al.   NATURE

Interaction Transcriptome Analysis Identifies Magnaporthe oryzae BAS1-4 as Biotrophy-Associated Secreted Proteins in Rice Blast Disease

(2009) G. Mosquera et al.   PLANT CELL

Molecular polymorphisms between populations ofPseudoperonospora cubensisfrom Greece and the Czech Republic and the phytopathological and phylogenetic implications

(2009) P. Sarris et al.   PLANT PATHOLOGY

The Phytophthora sojae Avirulence Locus Avr3c Encodes a Multi-Copy RXLR Effector with Sequence Polymorphisms among Pathogen Strains

(2009) Suomeng Dong et al.   PLoS One

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

cDNA-AFLP analysis of plant and pathogen genes expressed in grapevine infected with Plasmopara viticola

(2008) Marianna Polesani et al.   BMC GENOMICS

Structure of the Glucanase Inhibitor Protein (GIP) Family fromPhytophthoraSpecies Suggests Coevolution with Plant Endo-β-1,3-Glucanases

(2008) Cynthia M. B. Damasceno et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

(2008) B. L. Cantarel et al.   NUCLEIC ACIDS RESEARCH