The Drosophila Gap Gene Network Is Composed of Two Parallel Toggle Switches

Gene Expression Noise in Spatial Patterning: hunchback Promoter Structure Affects Noise Amplitude and Distribution in Drosophila Segmentation

(2011) David M. Holloway et al.   PLoS Computational Biology

How Long Does It Take to Establish a Morphogen Gradient?

(2010) Alexander M. Berezhkovskii et al.   BIOPHYSICAL JOURNAL

A Software Tool to Model Genetic Regulatory Networks. Applications to the Modeling of Threshold Phenomena and of Spatial Patterning in Drosophila

(2010) Rui Dilão et al.   PLoS One

Multiscale modeling of diffusion in the early Drosophila embryo

(2010) C. Sample et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantitative Analysis of the Drosophila Segmentation Regulatory Network Using Pattern Generating Potentials

(2010) Majid Kazemian et al.   PLOS BIOLOGY

Stripe formation in the early fly embryo: principles, models, and networks

(2009) Dmitri Papatsenko   BIOESSAYS

Organization of developmental enhancers in the Drosophila embryo

(2009) Dmitri Papatsenko et al.   NUCLEIC ACIDS RESEARCH

Canalization of Gene Expression in the Drosophila Blastoderm by Gap Gene Cross Regulation

(2009) Manu et al.   PLOS BIOLOGY

Mutual interaction in network motifs robustly sharpens gene expression in developmental processes

(2008) Shuji Ishihara et al.   JOURNAL OF THEORETICAL BIOLOGY

Analysis of combinatorial cis-regulation in synthetic and genomic promoters

(2008) Jason Gertz et al.   NATURE

FlyEx, the quantitative atlas on segmentation gene expression at cellular resolution

(2008) A. Pisarev et al.   NUCLEIC ACIDS RESEARCH

Network Evolution of Body Plans

(2008) Koichi Fujimoto et al.   PLoS One

Dual regulation by the Hunchback gradient in the Drosophila embryo

(2008) D. Papatsenko et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Spatial Bistability Generates hunchback Expression Sharpness in the Drosophila Embryo

(2008) Francisco J. P. Lopes et al.   PLoS Computational Biology