Evaluation of the hormonal state of columnar apple trees (Malus x domestica) based on high throughput gene expression studies

A comparison of statistical methods for detecting differentially expressed genes from RNA-seq data

(2012) Vanessa M. Kvam et al.   AMERICAN JOURNAL OF BOTANY

The transcriptomes of columnar and standard type apple trees (Malus x domestica) — A comparative study

(2012) Clemens Krost et al.   GENE

Characterization of Transcriptional Differences Between Columnar and Standard Apple Trees Using RNA-Seq

(2012) Yugang Zhang et al.   PLANT MOLECULAR BIOLOGY REPORTER

Hormone Signalling Crosstalk in Plant Growth Regulation

(2011) Stephen Depuydt et al.   CURRENT BIOLOGY

The effect of recurrent mutation on the linkage disequilibrium under a selective sweep

(2011) Cornelia Pokalyuk   JOURNAL OF MATHEMATICAL BIOLOGY

Computational methods for transcriptome annotation and quantification using RNA-seq

(2011) Manuel Garber et al.   NATURE METHODS

Signal integration in the control of shoot branching

(2011) Malgorzata A. Domagalska et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Overexpression of Brassica juncea wild-type and mutant HMG-CoA synthase 1 in Arabidopsis up-regulates genes in sterol biosynthesis and enhances sterol production and stress tolerance

(2011) Hui Wang et al.   PLANT BIOTECHNOLOGY JOURNAL

Jasmonate signaling involves the abscisic acid receptor PYL4 to regulate metabolic reprogramming in Arabidopsis and tobacco

(2011) P. Lackman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The genome of the domesticated apple (Malus × domestica Borkh.)

(2010) Riccardo Velasco et al.   NATURE GENETICS

Gibberellins Regulate Lateral Root Formation in Populus through Interactions with Auxin and Other Hormones

(2010) J. Gou et al.   PLANT CELL

The heterozygous abp1/ABP1 insertional mutant has defects in functions requiring polar auxin transport and in regulation of early auxin-regulated genes

(2010) Yunus Effendi et al.   PLANT JOURNAL

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Modulation of drought resistance by the abscisic acid receptor PYL5 through inhibition of clade A PP2Cs

(2009) Julia Santiago et al.   PLANT JOURNAL

Tracking footprints of maize domestication and evidence for a massive selective sweep on chromosome 10

(2009) F. Tian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Auxin–cytokinin interactions in the control of shoot branching

(2008) Sae Shimizu-Sato et al.   PLANT MOLECULAR BIOLOGY

The role of JAR1 in Jasmonoyl-l-isoleucine production during Arabidopsis wound response

(2008) Walter P. Suza et al.   PLANTA