Transcriptomes of isolatedOryza sativagametes characterized by deep sequencing: evidence for distinct sex-dependent chromatin and epigenetic states before fertilization

Gene expression profiles in rice gametes and zygotes: identification of gamete-enriched genes and up- or down-regulated genes in zygotes after fertilization

(2013) Mafumi Abiko et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome Profiling of the Murine Testis during the First Wave of Spermatogenesis

(2013) Asta Laiho et al.   PLoS One

Developmental relaxation of transposable element silencing in plants: functional or byproduct?

(2012) Germán Martínez et al.   CURRENT OPINION IN PLANT BIOLOGY

Characterization of Aquilegia Polycomb Repressive Complex 2 homologs reveals absence of imprinting

(2012) Emily J. Gleason et al.   GENE

DDM1 (Decrease in DNA Methylation) genes in rice (Oryza sativa)

(2012) Hiromi Higo et al.   MOLECULAR GENETICS AND GENOMICS

Maternal and paternal genomes contribute equally to the transcriptome of early plant embryos

(2012) Michael D. Nodine et al.   NATURE

The H3K27 demethylase Utx regulates somatic and germ cell epigenetic reprogramming

(2012) Abed AlFatah Mansour et al.   NATURE

Genomic profiling of rice sperm cell transcripts reveals conserved and distinct elements in the flowering plant male germ lineage

(2012) Scott D. Russell et al.   NEW PHYTOLOGIST

A large increase in IAA during development of rice grains correlates with the expression of tryptophan aminotransferaseOsTAR1and a grain-specificYUCCA

(2012) Yousef M. Abu-Zaitoon et al.   PHYSIOLOGIA PLANTARUM

A null mutation of ROS1a for DNA demethylation in rice is not transmittable to progeny

(2012) Akemi Ono et al.   PLANT JOURNAL

ThePolycombgroup protein MEDEA and the DNA methyltransferase MET1 interact to repress autonomous endosperm development in Arabidopsis

(2012) Anja Schmidt et al.   PLANT JOURNAL

Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples

(2012) Günter P. Wagner et al.   THEORY IN BIOSCIENCES

Histone modifications in transcriptional activation during plant development

(2011) Alexandre Berr et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Epigenetic gene regulation by plant Jumonji group of histone demethylase

(2011) Xiangsong Chen et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Identification and characterization of a rice MCM2 homologue required for DNA replycation

(2011) Jae-Han Cho et al.   BMB Reports

Maternal Epigenetic Pathways Control Parental Contributions to Arabidopsis Early Embryogenesis

(2011) Daphné Autran et al.   CELL

p2 of Rice stripe virus (RSV) interacts with OsSGS3 and is a silencing suppressor

(2011) ZHENGUO DU et al.   MOLECULAR PLANT PATHOLOGY

Arabidopsis REF6 is a histone H3 lysine 27 demethylase

(2011) Falong Lu et al.   NATURE GENETICS

Roles of DCL4 and DCL3b in rice phased small RNA biogenesis

(2011) Xianwei Song et al.   PLANT JOURNAL

Plant MCM proteins: role in DNA replication and beyond

(2011) Narendra Tuteja et al.   PLANT MOLECULAR BIOLOGY

Genome-Wide Analysis Reveals Gene Expression and Metabolic Network Dynamics during Embryo Development in Arabidopsis

(2011) D. Xiang et al.   PLANT PHYSIOLOGY

Functional genomics of pollen tube–pistil interactions inArabidopsis

(2010) Ravishankar Palanivelu et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Arabidopsis Female Gametophyte Gene Expression Map Reveals Similarities between Plant and Animal Gametes

(2010) Samuel E. Wuest et al.   CURRENT BIOLOGY

Histone variants and modifications in plant gene regulation

(2010) Roger B Deal et al.   CURRENT OPINION IN PLANT BIOLOGY

Molecular control of microsporogenesis in Arabidopsis

(2010) Fang Chang et al.   CURRENT OPINION IN PLANT BIOLOGY

Small RNA-mediated epigenetic modifications in plants

(2010) Stacey A Simon et al.   CURRENT OPINION IN PLANT BIOLOGY

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

(2010) Julie A. Law et al.   NATURE REVIEWS GENETICS

WAVY LEAF1, an Ortholog of Arabidopsis HEN1, Regulates Shoot Development by Maintaining MicroRNA and Trans-Acting Small Interfering RNA Accumulation in Rice

(2010) M. Abe et al.   PLANT PHYSIOLOGY

Distinct Gene Expression Profiles in Egg and Synergid Cells of Rice as Revealed by Cell Type-Specific Microarrays

(2010) T. Ohnishi et al.   PLANT PHYSIOLOGY

Local DNA hypomethylation activates genes in rice endosperm

(2010) A. Zemach et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Male gametogenesis and germline specification in flowering plants

(2010) David Twell   SEXUAL PLANT REPRODUCTION

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Epigenetic Reprogramming and Small RNA Silencing of Transposable Elements in Pollen

(2009) R. Keith Slotkin et al.   CELL

Rice cytosine DNA methyltransferases - gene expression profiling during reproductive development and abiotic stress

(2009) Rita Sharma et al.   FEBS Journal

Expression, Imprinting, and Evolution of Rice Homologs of the Polycomb Group Genes

(2009) Ming Luo et al.   Molecular Plant

mRNA-Seq whole-transcriptome analysis of a single cell

(2009) Fuchou Tang et al.   NATURE METHODS

Auxin-Dependent Patterning and Gamete Specification in the Arabidopsis Female Gametophyte

(2009) G. C. Pagnussat et al.   SCIENCE

Paternal Control of Embryonic Patterning in Arabidopsis thaliana

(2009) M. Bayer et al.   SCIENCE

Loss of RNA–Dependent RNA Polymerase 2 (RDR2) Function Causes Widespread and Unexpected Changes in the Expression of Transposons, Genes, and 24-nt Small RNAs

(2009) Yi Jia et al.   PLoS Genetics

Genome-wide identification, organization and phylogenetic analysis of Dicer-like, Argonaute and RNA-dependent RNA Polymerase gene families and their expression analysis during reproductive development and stress in rice

(2008) Meenu Kapoor et al.   BMC GENOMICS

Comparative Transcriptomics of Arabidopsis Sperm Cells

(2008) F. Borges et al.   PLANT PHYSIOLOGY

Retinoblastoma and Its Binding Partner MSI1 Control Imprinting in Arabidopsis

(2008) Pauline E Jullien et al.   PLOS BIOLOGY