4.8 Article

Interplay of MYB factors in differential cell expansion, and consequences for tomato fruit development

期刊

PLANT JOURNAL
卷 68, 期 2, 页码 337-350

出版社

WILEY
DOI: 10.1111/j.1365-313X.2011.04690.x

关键词

MYB; Solanum lycopersicum; tomato fruit growth; DIVARICATA; RADIALIS; Arabidopsis

资金

  1. United States-Israel Binational Agricultural Research and Development BARD Fund [IS-4012-07]
  2. Ministry of Agriculture, Israel [261-0414]

向作者/读者索取更多资源

We previously identified SlFSM1 as an early fruit-specific gene encoding a short protein harboring a non-canonical SANT/MYB-like domain. Here, we investigated the role of FSM1 during fruit development in tomato and its mode of action. By analyzing tomato plants ectopically expressing FSM1, we established that it negatively affects cell expansion, particularly of those cells with the highest potential to expand, such as those residing inner to the vascular bundles in the fruit pericarp. This function of FSM1 differs from that of the snapdragon FSM1-like gene, RAD, which through an antagonistic activity with DIV participates in establishing floral asymmetry. Revealing an additional component of the FSM1/RAD regulatory complex, we show here that FSM1 physically interacts with FSB1, a previously uncharacterized factor harboring an atypical MYB repeat. We also demonstrate that FSB1 physically interacts with the transcription factor MYBI, a homolog of DIV. Our results show that the formation of the FSB1-MYBI complex is competed by FSM1, which recognizes in FSB1 the same region as MYBI does. Taken together, these studies expose a function for the FSM1/FSB1/ MYBI complex in controlling tomato cell expansion, while revealing a mechanism by which competing MYB-MYB interactions could participate in the control of gene expression.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.8
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Biochemistry & Molecular Biology

A Maize Gene Regulatory Network for Phenolic Metabolism

Fan Yang, Wei Li, Nan Jiang, Haidong Yu, Kengo Morohashi, Wilberforce Zachary Ouma, Daniel E. Morales-Mantilla, Fabio Andres Gomez-Cano, Eric Mukundi, Luis Daniel Prada-Salcedo, Roberto Alers Velazquez, Jasmin Valentin, Maria Katherine Mejia-Guerra, John Gray, Andrea I. Doseff, Erich Grotewold

MOLECULAR PLANT (2017)

Letter Biochemistry & Molecular Biology

The BIF Domain in Plant bHLH Proteins Is an ACT-Like Domain

Antje Feller, Ling Yuan, Erich Grotewoldd

PLANT CELL (2017)

Article Biology

Point of View: The challenges faced by living stock collections in the USA

Kevin McCluskey, Kyria Boundy-Mills, Greg Dye, Erin Ehmke, Gregg F. Gunnell, Hippokratis Kiaris, Maxi Polihronakis Richmond, Anne D. Yoder, Daniel R. Zeigler, Sarah Zehr, Erich Grotewold

Article Biochemical Research Methods

Topological and statistical analyses of gene regulatory networks reveal unifying yet quantitatively different emergent properties

Wilberforce Zachary Ouma, Katja Pogacar, Erich Grotewold

PLOS COMPUTATIONAL BIOLOGY (2018)

Article Biochemistry & Molecular Biology

Meta Gene Regulatory Networks in Maize Highlight Functionally Relevant Regulatory Interactions

Peng Zhou, Zhi Li, Erika Magnusson, Fabio Gomez Cano, Peter A. Crisp, Jaclyn M. Noshay, Erich Grotewold, Candice N. Hirsch, Steven P. Briggs, Nathan M. Springer

PLANT CELL (2020)

Article Multidisciplinary Sciences

Synergy between the anthocyanin and RDR6/SGS3/DCL4 siRNA pathways expose hidden features of Arabidopsis carbon metabolism

Nan Jiang, Aimer Gutierrez-Diaz, Eric Mukundi, Yun Sun Lee, Blake C. Meyers, Marisa S. Otegui, Erich Grotewold

NATURE COMMUNICATIONS (2020)

Correction Multidisciplinary Sciences

Synergy between the anthocyanin and RDR6/SGS3/DCL4 siRNA pathways expose hidden features of Arabidopsis carbon metabolism (vol 11, 2456, 2020)

Nan Jiang, Aimer Gutierrez-Diaz, Eric Mukundi, Yun Sun Lee, Blake C. Meyers, Marisa S. Otegui, Erich Grotewold

NATURE COMMUNICATIONS (2020)

Article Biochemistry & Molecular Biology

A hydrophobic residue stabilizes dimers of regulatory ACT-like domains in plant basic helix-loop-helix transcription factors

Yun Sun Lee, Andres Herrera-Tequia, Jagannath Silwal, James H. Geiger, Erich Grotewold

Summary: The research reveals the importance of ACT-like domains in the dimerization of plant bHLH transcription factors, showing variations in dimerization affinity among different domains which may impact their functional regulation in cells. Through comparisons and mutational analyses, the results provide new insights into potential regulatory mechanisms of plant ACT-like domains.

JOURNAL OF BIOLOGICAL CHEMISTRY (2021)

Article Biochemistry & Molecular Biology

Prediction of conserved and variable heat and cold stress response in maize using cis-regulatory information

Peng Zhou, Tara A. Enders, Zachary A. Myers, Erika Magnusson, Peter A. Crisp, Jaclyn M. Noshay, Fabio Gomez-Cano, Zhikai Liang, Erich Grotewold, Kathleen Greenham, Nathan M. Springer

Summary: Changes in gene expression are crucial for responses to abiotic stress. Transcriptome profiling of heat- or cold-stressed maize genotypes reveals many alterations in transcript abundance. By analyzing expression responses in multiple genotypes and identifying cis- or trans-regulatory variation, predictive models of gene expression responses for thermal stress-responsive genes can be developed. Models focusing on unmethylated regions near the transcription start sites (TSSs) show improved accuracy, suggesting that different genes may have varying response dynamics to stress.

PLANT CELL (2022)

Article Biochemistry & Molecular Biology

Modeling temporal and hormonal regulation of plant transcriptional response to wounding

Bethany M. Moore, Yun Sun Lee, Peipei Wang, Christina Azodi, Erich Grotewold, Shin-Han Shiu

Summary: The modeling and experimental validation of transcriptional response to wounding and jasmonic acid identified temporal cis-regulatory codes and new regulatory sequences important for wound response. The study provides a global predictive model for wound response and highlights the significance of regulatory factors and open chromatin regions in different types of wound response.

PLANT CELL (2022)

Review Biochemistry & Molecular Biology

Cis-regulatory sequences in plants: Their importance, discovery, and future challenges

Robert J. Schmitz, Erich Grotewold, Maike Stam

Summary: This review discusses the characteristics, identification technologies, and role of cis-regulatory sequences in plant biology. Despite advances in sequence assembly and genome annotation, there are still challenges in identifying and understanding cis-regulatory modules.

PLANT CELL (2022)

Article Plant Sciences

Exploring Camelina sativa lipid metabolism regulation by combining gene co-expression and DNA affinity purification analyses

Fabio Gomez-Cano, Yi-Hsuan Chu, Mariel Cruz-Gomez, Hesham M. Abdullah, Yun Sun Lee, Danny J. Schnell, Erich Grotewold

Summary: Predicting transcription factors (TFs) associated with Camelina lipid metabolism using gene expression datasets. Identified DNA-binding sites and predicted target genes for 16 TFs using DNA affinity purification followed by sequencing. These TFs may play important roles in seed fatty acid elongation and triacylglycerol synthesis and degradation.

PLANT JOURNAL (2022)

Article Genetics & Heredity

Natural variation and improved genome annotation of the emerging biofuel crop field pennycress (Thlaspi arvense)

Tatiana Garcia Navarrete, Cintia Arias, Eric Mukundi, Ana Paula Alonso, Erich Grotewold

Summary: Pennycress, a plant with suitable seed oil composition for biodiesel and aviation fuel production, requires domestication of its wild traits for cultivation. This study improved the genome annotation of pennycress and identified protein-coding genes and biallelic SNPs. Several candidate genes under likely recent positive selection were also discovered, which could be potential targets for crop improvement efforts in pennycress.

G3-GENES GENOMES GENETICS (2022)

Article Biochemistry & Molecular Biology

Normalizing and Correcting Variable and Complex LC-MS Metabolomic Data with the R Package pseudoDrift

Jonas Rodriguez, Lina Gomez-Cano, Erich Grotewold, Natalia de Leon

Summary: This article discusses the importance of liquid chromatography-mass spectroscopy (LC-MS) in biological research and the challenges posed by technical errors. A new approach called pseudoDrift is proposed to detect and correct these errors, with demonstrated effectiveness and flexibility through data simulation. The analysis of a phenolic compound dataset from non-transgenic maize inbred lines showcases the application of this method in studying the dynamics of specialized metabolism in plants.

METABOLITES (2022)

Article Plant Sciences

Multiscale physiological responses to nitrogen supplementation of maize hybrids

Sheng Ying, Brandon Webster, Lina Gomez-Cano, Kiran-Kumar Shivaiah, Qianjie Wang, Linsey Newton, Erich Grotewold, Addie Thompson, Peter K. Lundquist

Summary: Maize production systems heavily rely on managed inputs, such as fertilizers, to maximize growth and yield. This study investigates the physiological responses of maize hybrids to nitrogen (N) supplementation in field conditions. The results reveal that maize perceives the lack of N as a stress and responds to N supplementation with prolonged vegetative growth. The study also identifies potential biomarkers of N status.

PLANT PHYSIOLOGY (2023)

暂无数据