Chaperone network composition inSolanum lycopersicumexplored by transcriptome profiling and microarray meta-analysis

Temperature-dependent differential transcriptomes during formation of an epigenetic memory in Norway spruce embryogenesis

(2014) Igor A. Yakovlev et al.   Tree Genetics & Genomes

Perspectives on deciphering mechanisms underlying plant heat stress response and thermotolerance

(2014) Kamila Bokszczanin   Frontiers in Plant Science

The protein translocation systems in plants – composition and variability on the example of Solanum lycopersicum

(2013) Puneet Paul et al.   BMC GENOMICS

Massive analysis of cDNA Ends (MACE) and miRNA expression profiling identifies proatherogenic pathways in chronic kidney disease

(2013) Adam M Zawada et al.   Epigenetics

Common and Distinct Functions of Arabidopsis Class A1 and A2 Heat Shock Factors in Diverse Abiotic Stress Responses and Development

(2013) H.-c. Liu et al.   PLANT PHYSIOLOGY

Interplay between Heat Shock Proteins HSP101 and HSA32 Prolongs Heat Acclimation Memory Posttranscriptionally in Arabidopsis

(2013) T.-y. Wu et al.   PLANT PHYSIOLOGY

Identification of a Tissue-Selective Heat Shock Response Regulatory Network

(2013) Eric Guisbert et al.   PLoS Genetics

RNA-seq and microarray complement each other in transcriptome profiling

(2012) Sunitha Kogenaru et al.   BMC GENOMICS

Functional analysis of Hsp70 superfamily proteins of rice (Oryza sativa)

(2012) Neelam K. Sarkar et al.   CELL STRESS & CHAPERONES

The evolution, function, structure, and expression of the plant sHSPs

(2012) Elizabeth R. Waters   JOURNAL OF EXPERIMENTAL BOTANY

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

ArrayExpress update—trends in database growth and links to data analysis tools

(2012) Gabriella Rustici et al.   NUCLEIC ACIDS RESEARCH

Proteomic Analysis of Chloroplast-to-Chromoplast Transition in Tomato Reveals Metabolic Shifts Coupled with Disrupted Thylakoid Biogenesis Machinery and Elevated Energy-Production Components

(2012) C. Barsan et al.   PLANT PHYSIOLOGY

Exploring Tomato Gene Functions Based on Coexpression Modules Using Graph Clustering and Differential Coexpression Approaches

(2012) A. Fukushima et al.   PLANT PHYSIOLOGY

Some like it hot, some like it warm: Phenotyping to explore thermotolerance diversity

(2012) Ching-Hui Yeh et al.   PLANT SCIENCE

Downregulation of Chloroplast RPS1 Negatively Modulates Nuclear Heat-Responsive Expression of HsfA2 and Its Target Genes in Arabidopsis

(2012) Hai-Dong Yu et al.   PLoS Genetics

The plant heat stress transcription factor (Hsf) family: Structure, function and evolution

(2011) Klaus-Dieter Scharf et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

PGAP: pan-genomes analysis pipeline

(2011) Yongbing Zhao et al.   BIOINFORMATICS

Exon array data analysis using Affymetrix power tools and R statistical software

(2011) H. E. Lockstone   BRIEFINGS IN BIOINFORMATICS

The Pfam protein families database

(2011) M. Punta et al.   NUCLEIC ACIDS RESEARCH

Tomato TILLING Technology: Development of a Reverse Genetics Tool for the Efficient Isolation of Mutants from Micro-Tom Mutant Libraries

(2011) Yoshihiro Okabe et al.   PLANT AND CELL PHYSIOLOGY

Crosstalk between Hsp90 and Hsp70 Chaperones and Heat Stress Transcription Factors in Tomato

(2011) Alexander Hahn et al.   PLANT CELL

Identification of the MBF1 heat-response regulon of Arabidopsis thaliana

(2011) Nobuhiro Suzuki et al.   PLANT JOURNAL

High-Throughput Analysis of Calcium Signalling Kinetics in Astrocytes Stimulated with Different Neurotransmitters

(2011) Laura R. James et al.   PLoS One

The Clp protease system; a central component of the chloroplast protease network

(2010) Paul Dominic B. Olinares et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Genome-wide analysis of rice ClpB/HSP100, ClpC and ClpD genes

(2010) Amanjot Singh et al.   BMC GENOMICS

Meta-analysis of heat- and chemically upregulated chaperone genes in plant and human cells

(2010) Andrija Finka et al.   CELL STRESS & CHAPERONES

Transmembrane BAX Inhibitor Motif Containing (TMBIM) Family Proteins Perturbs atrans-Golgi Network Enzyme, Gb3 Synthase, and Reduces Gb3 Biosynthesis

(2010) Toshiyuki Yamaji et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Gymnastics of Molecular Chaperones

(2010) Matthias P. Mayer   MOLECULAR CELL

Functional characterization of Arabidopsis thaliana WRKY39 in heat stress

(2010) Shujia Li et al.   MOLECULES AND CELLS

Common ground for protein translocation: access control for mitochondria and chloroplasts

(2010) Enrico Schleiff et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

HSP90 at the hub of protein homeostasis: emerging mechanistic insights

(2010) Mikko Taipale et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Tomato Functional Genomics Database: a comprehensive resource and analysis package for tomato functional genomics

(2010) Z. Fei et al.   NUCLEIC ACIDS RESEARCH

The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl

(2010) A. Bombarely et al.   NUCLEIC ACIDS RESEARCH

Endoplasmic Reticulum Protein Quality Control and Its Relationship to Environmental Stress Responses in Plants

(2010) Jian-Xiang Liu et al.   PLANT CELL

The Heat-Inducible Transcription Factor HsfA2 Enhances Anoxia Tolerance in Arabidopsis

(2010) V. Banti et al.   PLANT PHYSIOLOGY

Arabidopsis thaliana J-class heat shock proteins: cellular stress sensors

(2009) Vinoth Babu V. Rajan et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Specific Interaction between Tomato HsfA1 and HsfA2 Creates Hetero-oligomeric Superactivator Complexes for Synergistic Activation of Heat Stress Gene Expression

(2009) Kwan Yu Chan-Schaminet et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Characterization of mitochondrial dynamics and subcellular localization of ROS reveal that HsfA2 alleviates oxidative damage caused by heat stress in Arabidopsis

(2009) Lingrui Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptional profiling of maturing tomato (Solanum lycopersicum L.) microspores reveals the involvement of heat shock proteins, ROS scavengers, hormones, and sugars in the heat stress response

(2009) Gil Frank et al.   JOURNAL OF EXPERIMENTAL BOTANY

Developmental and heat stress-regulated expression of HsfA2 and small heat shock proteins in tomato anthers

(2009) Filomena Giorno et al.   JOURNAL OF EXPERIMENTAL BOTANY

Large Scale Comparative Proteomics of a Chloroplast Clp Protease Mutant Reveals Folding Stress, Altered Protein Homeostasis, and Feedback Regulation of Metabolism

(2009) Boris Zybailov et al.   MOLECULAR & CELLULAR PROTEOMICS

The Cytosolic Protein Response as a Subcomponent of the Wider Heat Shock Response in Arabidopsis

(2009) A. Sugio et al.   PLANT CELL

Arabidopsis ROF1 (FKBP62) modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs

(2009) David Meiri et al.   PLANT JOURNAL

Involvement of Arabidopsis ROF2 (FKBP65) in thermotolerance

(2009) David Meiri et al.   PLANT MOLECULAR BIOLOGY

Role of Temperature Stress on Chloroplast Biogenesis and Protein Import in Pea

(2009) S. Dutta et al.   PLANT PHYSIOLOGY

Identification of new protein substrates for the chloroplast ATP-dependent Clp protease supports its constitutive role inArabidopsis

(2008) Tara M. Stanne et al.   BIOCHEMICAL JOURNAL

An extensive (co-)expression analysis tool for the cytochrome P450 superfamily in Arabidopsis thaliana

(2008) Jürgen Ehlting et al.   BMC PLANT BIOLOGY

The plant sHSP superfamily: five new members in Arabidopsis thaliana with unexpected properties

(2008) Masood Siddique et al.   CELL STRESS & CHAPERONES

Comparative analysis of the small heat shock proteins in three angiosperm genomes identifies new subfamilies and reveals diverse evolutionary patterns

(2008) Elizabeth R. Waters et al.   CELL STRESS & CHAPERONES

The Transcriptional Co-activator MBF1c Is a Key Regulator of Thermotolerance inArabidopsis thaliana

(2008) Nobuhiro Suzuki et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Functional dissection of the cytosolic chaperone network in tomato mesophyll protoplasts

(2008) JOANNA TRIPP et al.   PLANT CELL AND ENVIRONMENT

A membrane-tethered transcription factor defines a branch of the heat stress response in Arabidopsis thaliana

(2008) H. Gao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA