4.4 Article

Pancreatic Stellate Cell Models for Transcriptional Studies of Desmoplasia-Associated Genes

期刊

PANCREATOLOGY
卷 10, 期 4, 页码 505-516

出版社

ELSEVIER SCIENCE BV
DOI: 10.1159/000320540

关键词

Pancreatic stellate cells; Cancer; Desmoplasia; Transforming growth factor-beta; Transcription factors; Epigenetics

资金

  1. NIDDK NIH HHS [P30 DK084567, R01 DK052913] Funding Source: Medline
  2. NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES [P30DK084567, R01DK052913] Funding Source: NIH RePORTER

向作者/读者索取更多资源

Background: Pancreatic stellate cells are emerging as key players in pathophysiopathological processes underlying the development of pancreatic disease, including pancreatitis and cancer. The cells are scarce in the pancreas making their isolation time and resource use consuming. Methods: Therefore, with the ultimate goal of facilitating mechanistic studies, here we report the isolation, characterization, and immortalization of stellate cell lines from rat and mouse origin. Results: These cell lines display morphological and molecular markers as well as non-tumorigenic characteristics similar to the frequently used hepatic counterparts. In addition, we have tested their robustness as a model for transcriptional regulatory studies. We find that these cells respond well to TGF beta signaling by triggering a distinct cascade of gene expression, some genes overlap with the TGF beta response of LX2 cells. These cells express several key chromatin proteins and epigenetic regulators involved in the regulation of gene expression, including co-repressors such as Sin3A (short-term repression), HP1 (long-term repression), as well as CBP/p300 (activation). Furthermore, these cells are well suited for Gal4-based transcriptional activation and repression assays. Conclusions: The cell model reported here may therefore help fuel investigations in the field of signaling, transcription, and perhaps other studies on similarly exciting cellular processes. Copyright (C) 2010 S. Karger AG, Basel and IAP

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.4
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

Article Cell Biology

Aurora kinase B-phosphorylated HP1α functions in chromosomal instability

Monique M. Williams, Angela J. Mathison, Trent Christensen, Patricia T. Greipp, Darlene L. Knutson, Eric W. Klee, Michael T. Zimmermann, Juan Iovanna, Gwen A. Lomberk, Raul A. Urrutia

CELL CYCLE (2019)

Article Biochemistry & Molecular Biology

Modeling post-translational modifications and cancer-associated mutations that impact the heterochromatin protein 1α-importin α heterodimers

Michael T. Zimmermann, Monique M. Williams, Eric W. Klee, Gwen A. Lomberk, Raul Urrutia

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2019)

Review Multidisciplinary Sciences

Emerging epigenomic landscapes of pancreatic cancer in the era of precision medicine

Gwen Lomberk, Nelson Dusetti, Juan Iovanna, Raul Urrutia

NATURE COMMUNICATIONS (2019)

Review Cell Biology

Targeting the Stress-Induced Protein NUPR1 to Treat Pancreatic Adenocarcinoma

Patricia Santofimia-Castano, Yi Xia, Ling Peng, Adrian Velazquez-Campoy, Olga Abian, Wenjun Lan, Gwen Lomberk, Raul Urrutia, Bruno Rizzuti, Philippe Soubeyran, Jose Luis Neira, Juan Iovanna

Article Oncology

Combined Targeting of G9a and Checkpoint Kinase 1 Synergistically Inhibits Pancreatic Cancer Cell Growth by Replication Fork Collapse

Guillermo Urrutia, Ann Salmonson, Jorge Toro-Zapata, Thiago M. de Assuncao, Angela Mathison, Nelson Dusetti, Juan Iovanna, Raul Urrutia, Gwen Lomberk

MOLECULAR CANCER RESEARCH (2020)

Article Multidisciplinary Sciences

Discovery, expression, cellular localization, and molecular properties of a novel, alternative spliced HP1γ isoform, lacking the chromoshadow domain

Angela Mathison, Thiago Milech De Assuncao, Nikita R. Dsouza, Monique Williams, Michael T. Zimmermann, Raul Urrutia, Gwen Lomberk

PLOS ONE (2020)

Article Genetics & Heredity

Microglia Influence Neurofilament Deposition in ALS iPSC-Derived Motor Neurons

Reilly L. Allison, Jacob W. Adelman, Jenica Abrudan, Raul A. Urrutia, Michael T. Zimmermann, Angela J. Mathison, Allison D. Ebert

Summary: Amyotrophic lateral sclerosis (ALS) is a fatal neurodegenerative disease with unclear mechanisms. A study found that glial-secreted factors may affect the expression and deposition of neurofilament proteins in motor neurons of ALS patients.
Article Oncology

Multi-omics data integration and modeling unravels new mechanisms for pancreatic cancer and improves prognostic prediction

Nicolas A. Fraunhoffer, Analia Meilerman Abuelafia, Martin Bigonnet, Odile Gayet, Julie Roques, Remy Nicolle, Gwen Lomberk, Raul Urrutia, Nelson Dusetti, Juan Iovanna

Summary: This study developed a Master Regulators (MR)-Gradient model based on transcriptomic profiles derived from both PDAC epithelial and microenvironment cells to reveal the transcriptional networks, epigenomic states, and metabolic pathways underlying PDAC heterogeneity. Integration of methylome and metabolome datasets, along with experimental measurements, showed a close association between PDAC prognosis, tumor epithelial cell phenotype, and immunological component. Metabolic analysis indicated a positive correlation between favorable PDAC phenotype and enzymes involved in complex lipid biosynthesis, while an unfavorable phenotype exhibited an OXPHOS independent metabolism centered on the Warburg effect and glutaminolysis. The study also identified key deregulated pathways in PDAC related to epigenetics.

NPJ PRECISION ONCOLOGY (2022)

Article Biology

NUPR1 protects against hyperPARylation-dependent cell death

Patricia Santofimia-Castano, Can Huang, Xi Liu, Yi Xia, Stephane Audebert, Luc Camoin, Ling Peng, Gwen Lomberk, Raul Urrutia, Philippe Soubeyran, Jose Luis Neira, Juan Iovanna

Summary: Mutations or treatment with the NUPR1 inhibitor ZZW-115 can inhibit the activity of PARP1 and induce cell death. Treatment with ZZW-115 or genetic inactivation of NUPR1 leads to mitochondrial catastrophe, which can be partially rescued by olaparib and NAD(+) precursor nicotinamide mononucleotide.

COMMUNICATIONS BIOLOGY (2022)

Article Cell Biology

KLF5 and p53 comprise an incoherent feed-forward loop directing cell-fate decisions following stress

Yizeng Yang, Dharmendra Bhargava, Xiao Chen, Taicheng Zhou, Gizem Dursuk, Wenpeng Jiang, Jinshen Wang, Zhen Zong, Sharyn I. Katz, Gwen A. Lomberk, Raul A. Urrutia, Jonathan P. Katz

Summary: In non-transformed human squamous epithelial cells, the decision of whether to arrest or undergo apoptosis in response to stress is mediated by the interaction between p53 and the zinc-finger transcription factor KLF5. The levels of cellular stress determine the specific outcome, with moderate stress leading to cell survival and severe stress resulting in apoptosis.

CELL DEATH & DISEASE (2023)

Article Biochemistry & Molecular Biology

A multi-layered computational structural genomics approach enhances domain-specific interpretation of Kleefstra syndrome variants in EHMT1

Young-In Chi, Davin R. Jensen, Brian C. Smith, Brian F. Volkman, Angela J. Mathison, Gwen Lomberk, Michael T. Zimmermann, Raul Urrutia

Summary: This study investigates the functional significance of various variants of uncertain significance in the EHMT1 protein. By combining traditional tools with computational methods, the researchers were able to classify the variants into different categories based on their structural and dynamic properties. The damaging variants were found to be located near important functional sites. This study improves upon conventional tools for variant interpretation and provides a molecular mechanism for variant dysfunction.

COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL (2023)

Meeting Abstract Gastroenterology & Hepatology

METHYLTRANSFERASE G9A AS AN EPIGENOMIC REGULATOR OF INTESTINAL INFLAMMATION

Guilherme Piovezani Ramos, Mary R. Sagstetter, Manuel Bonfim Braga Neto, Joseph M. Gaballa, Olga F. Sarmento, Michelle Gonzalez, Adebowale O. Bamidele, Raul Urrutia, Gwen Lomberk, William Faubion

GASTROENTEROLOGY (2019)

Article Gastroenterology & Hepatology

Enhancer of Zeste Homologue 2 Inhibition Attenuates TGF-β Dependent Hepatic Stellate Cell Activation and Liver Fibrosis

Rosa Martin-Mateos, Thiago M. De Assuncao, Juan Pablo Arab, Nidhi Jalan-Sakrikar, Usman Yagoob, Thomas Greuter, Vikas K. Verma, Angela J. Mathison, Sheng Cao, Gwen Lomberk, Philippe Mathurin, Raul Urrutia, Robert C. Huebert, Vijay H. Shah

CELLULAR AND MOLECULAR GASTROENTEROLOGY AND HEPATOLOGY (2019)

暂无数据