On the Robustness to Gene Tree Estimation Error (or lack thereof) of Coalescent-Based Species Tree Methods
出版年份 2015 全文链接
标题
On the Robustness to Gene Tree Estimation Error (or lack thereof) of Coalescent-Based Species Tree Methods
作者
关键词
-
出版物
SYSTEMATIC BIOLOGY
Volume 64, Issue 4, Pages 663-676
出版商
Oxford University Press (OUP)
发表日期
2015-03-28
DOI
10.1093/sysbio/syv016
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Quartet Inference from SNP Data Under the Coalescent Model
- (2014) Julia Chifman et al. BIOINFORMATICS
- ASTRAL: genome-scale coalescent-based species tree estimation
- (2014) S. Mirarab et al. BIOINFORMATICS
- BBCA: Improving the scalability of *BEAST using random binning
- (2014) Théo Zimmermann et al. BMC GENOMICS
- Disk covering methods improve phylogenomic analyses
- (2014) Md Shamsuzzoha Bayzid et al. BMC GENOMICS
- Phylogenetic analysis at deep timescales: Unreliable gene trees, bypassed hidden support, and the coalescence/concatalescence conundrum
- (2014) John Gatesy et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Phylotranscriptomic analysis of the origin and early diversification of land plants
- (2014) Norman J. Wickett et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Whole-genome analyses resolve early branches in the tree of life of modern birds
- (2014) E. D. Jarvis et al. SCIENCE
- Naive binning improves phylogenomic analyses
- (2013) Md Shamsuzzoha Bayzid et al. BIOINFORMATICS
- A Phylogeny of Birds Based on Over 1,500 Loci Collected by Target Enrichment and High-Throughput Sequencing
- (2013) John E. McCormack et al. PLoS One
- Concatenation versus coalescence versus "concatalescence"
- (2013) J. Gatesy et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model
- (2012) S. Song et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis
- (2011) J. E. McCormack et al. GENOME RESEARCH
- Incomplete lineage sorting patterns among human, chimpanzee, and orangutan suggest recent orangutan speciation and widespread selection
- (2011) A. Hobolth et al. GENOME RESEARCH
- BUCKy: Gene tree/species tree reconciliation with Bayesian concordance analysis
- (2010) Bret R. Larget et al. BIOINFORMATICS
- A maximum pseudo-likelihood approach for estimating species trees under the coalescent model
- (2010) Liang Liu et al. BMC EVOLUTIONARY BIOLOGY
- Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent
- (2010) Elizabeth S. Allman et al. JOURNAL OF MATHEMATICAL BIOLOGY
- The Accuracy of Species Tree Estimation under Simulation: A Comparison of Methods
- (2010) Adam D. Leaché et al. SYSTEMATIC BIOLOGY
- STEM: species tree estimation using maximum likelihood for gene trees under coalescence
- (2009) Laura S. Kubatko et al. BIOINFORMATICS
- Fast and Consistent Estimation of Species Trees Using Supermatrix Rooted Triples
- (2009) Michael DeGiorgio et al. MOLECULAR BIOLOGY AND EVOLUTION
- Bayesian Inference of Species Trees from Multilocus Data
- (2009) J. Heled et al. MOLECULAR BIOLOGY AND EVOLUTION
- Properties of Consensus Methods for Inferring Species Trees from Gene Trees
- (2009) James H. Degnan et al. SYSTEMATIC BIOLOGY
- Estimating Species Phylogenies Using Coalescence Times among Sequences
- (2009) Liang Liu et al. SYSTEMATIC BIOLOGY
- Gene tree discordance, phylogenetic inference and the multispecies coalescent
- (2009) James H. Degnan et al. TRENDS IN ECOLOGY & EVOLUTION
- BEST: Bayesian estimation of species trees under the coalescent model
- (2008) L. Liu BIOINFORMATICS
- Rooted triple consensus and anomalous gene trees
- (2008) Gregory B Ewing et al. BMC EVOLUTIONARY BIOLOGY
- IS A NEW AND GENERAL THEORY OF MOLECULAR SYSTEMATICS EMERGING?
- (2008) Scott V. Edwards EVOLUTION
- Quartets MaxCut: A Divide and Conquer Quartets Algorithm
- (2008) Sagi Snir et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- Maximum Likelihood Supertrees
- (2008) Mike Steel et al. SYSTEMATIC BIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now