标题
Integrated RNA and DNA sequencing improves mutation detection in low purity tumors
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume 42, Issue 13, Pages e107-e107
出版商
Oxford University Press (OUP)
发表日期
2014-06-27
DOI
10.1093/nar/gku489
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Abstract 5195: Kidney injury molecule-1: a novel therapeutic target in renal cell carcinoma.
- (2014) Venkata Sabbisetti et al. CANCER RESEARCH
- A comparative analysis of algorithms for somatic SNV detection in cancer
- (2013) Nicola D. Roberts et al. BIOINFORMATICS
- Massively parallel sequencing, aCGH, and RNA-Seq technologies provide a comprehensive molecular diagnosis of Fanconi anemia
- (2013) S. C. Chandrasekharappa et al. BLOOD
- Comparing somatic mutation-callers: beyond Venn diagrams
- (2013) Su Kim et al. BMC BIOINFORMATICS
- Identification of somatic mutations in human prostate cancer by RNA-Seq
- (2013) XiaoLin Xu et al. GENE
- RNA-seq-based mapping and candidate identification of mutations from forward genetic screens
- (2013) A. C. Miller et al. GENOME RESEARCH
- MMAPPR: Mutation Mapping Analysis Pipeline for Pooled RNA-seq
- (2013) J. T. Hill et al. GENOME RESEARCH
- New Approaches to Molecular Diagnosis
- (2013) Bruce R. Korf et al. JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION
- MicroRNA-mediated loss of ADAR1 in metastatic melanoma promotes tumor growth
- (2013) Yael Nemlich et al. JOURNAL OF CLINICAL INVESTIGATION
- Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
- (2013) Kristian Cibulskis et al. NATURE BIOTECHNOLOGY
- BlackOPs: increasing confidence in variant detection through mappability filtering
- (2013) Christopher R. Cabanski et al. NUCLEIC ACIDS RESEARCH
- The UCSC Genome Browser database: 2014 update
- (2013) Donna Karolchik et al. NUCLEIC ACIDS RESEARCH
- Strelka: accurate somatic small-variant calling from sequenced tumor–normal sample pairs
- (2012) Christopher T. Saunders et al. BIOINFORMATICS
- Exome versus transcriptome sequencing in identifying coding region variants
- (2012) Chee-Seng Ku et al. EXPERT REVIEW OF MOLECULAR DIAGNOSTICS
- VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing
- (2012) D. C. Koboldt et al. GENOME RESEARCH
- Comprehensive molecular portraits of human breast tumours
- (2012) Daniel C. Koboldt et al. NATURE
- Absolute quantification of somatic DNA alterations in human cancer
- (2012) Scott L Carter et al. NATURE BIOTECHNOLOGY
- Differential Pathogenesis of Lung Adenocarcinoma Subtypes Involving Sequence Mutations, Copy Number, Chromosomal Instability, and Methylation
- (2012) Matthew D. Wilkerson et al. PLoS One
- RNA editing of protein sequences: A rare event in human transcriptomes
- (2012) C. L. Kleinman et al. RNA
- IEG's Role in Evaluating Climate Financing--Response
- (2012) S. D. Donner et al. SCIENCE
- Comment on "Widespread RNA and DNA Sequence Differences in the Human Transcriptome"
- (2012) W. Lin et al. SCIENCE
- Activating HER2 Mutations in HER2 Gene Amplification Negative Breast Cancer
- (2012) Ron Bose et al. Cancer Discovery
- Screening the human exome: a comparison of whole genome and whole transcriptome sequencing
- (2012) Elizabeth T Cirulli et al. GENOME BIOLOGY
- SomaticSniper: identification of somatic point mutations in whole genome sequencing data
- (2011) David E. Larson et al. BIOINFORMATICS
- Whole transcriptome sequencing reveals recurrent NOTCH1 mutations in mantle cell lymphoma
- (2011) R. Kridel et al. BLOOD
- Optimally weighted Z-test is a powerful method for combining probabilities in meta-analysis
- (2011) D. V. ZAYKIN JOURNAL OF EVOLUTIONARY BIOLOGY
- Integrative genomics viewer
- (2011) James T Robinson et al. NATURE BIOTECHNOLOGY
- Exome sequencing as a tool for Mendelian disease gene discovery
- (2011) Michael J. Bamshad et al. NATURE REVIEWS GENETICS
- Personalized Oncology Through Integrative High-Throughput Sequencing: A Pilot Study
- (2011) S. Roychowdhury et al. Science Translational Medicine
- SNVMix: predicting single nucleotide variants from next-generation sequencing of tumors
- (2010) Rodrigo Goya et al. BIOINFORMATICS
- Lung Squamous Cell Carcinoma mRNA Expression Subtypes Are Reproducible, Clinically Important, and Correspond to Normal Cell Types
- (2010) M. D. Wilkerson et al. CLINICAL CANCER RESEARCH
- Advances in understanding cancer genomes through second-generation sequencing
- (2010) Matthew Meyerson et al. NATURE REVIEWS GENETICS
- ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data
- (2010) K. Wang et al. NUCLEIC ACIDS RESEARCH
- COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer
- (2010) S. A. Forbes et al. NUCLEIC ACIDS RESEARCH
- MapSplice: Accurate mapping of RNA-seq reads for splice junction discovery
- (2010) Kai Wang et al. NUCLEIC ACIDS RESEARCH
- VarScan: variant detection in massively parallel sequencing of individual and pooled samples
- (2009) Daniel C. Koboldt et al. BIOINFORMATICS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- The cancer genome
- (2009) Michael R. Stratton et al. NATURE
- Mutation ofFOXL2in Granulosa-Cell Tumors of the Ovary
- (2009) Sohrab P. Shah et al. NEW ENGLAND JOURNAL OF MEDICINE
- RNA-Seq: a revolutionary tool for transcriptomics
- (2008) Zhong Wang et al. NATURE REVIEWS GENETICS
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search