标题
DEEP: a general computational framework for predicting enhancers
作者
关键词
-
出版物
NUCLEIC ACIDS RESEARCH
Volume 43, Issue 1, Pages e6-e6
出版商
Oxford University Press (OUP)
发表日期
2014-11-07
DOI
10.1093/nar/gku1058
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Enhancer Function: Mechanistic and Genome-Wide Insights Come Together
- (2014) Jennifer L. Plank et al. MOLECULAR CELL
- An atlas of active enhancers across human cell types and tissues
- (2014) Robin Andersson et al. NATURE
- A promoter-level mammalian expression atlas
- (2014) NATURE
- Integrating Diverse Datasets Improves Developmental Enhancer Prediction
- (2014) Genevieve D. Erwin et al. PLoS Computational Biology
- Interplay between chromatin state, regulator binding, and regulatory motifs in six human cell types
- (2013) J. Ernst et al. GENOME RESEARCH
- RFECS: A Random-Forest Based Algorithm for Enhancer Identification from Chromatin State
- (2013) Nisha Rajagopal et al. PLoS Computational Biology
- Presenting ENCODE
- (2012) Magdalena Skipper et al. NATURE
- Unsupervised pattern discovery in human chromatin structure through genomic segmentation
- (2012) Michael M Hoffman et al. NATURE METHODS
- ChromHMM: automating chromatin-state discovery and characterization
- (2012) Jason Ernst et al. NATURE METHODS
- Genome-wide enhancer prediction from epigenetic signatures using genetic algorithm-optimized support vector machines
- (2012) Michael Fernández et al. NUCLEIC ACIDS RESEARCH
- HOCOMOCO: a comprehensive collection of human transcription factor binding sites models
- (2012) Ivan V. Kulakovskiy et al. NUCLEIC ACIDS RESEARCH
- Integrative annotation of chromatin elements from ENCODE data
- (2012) Michael M. Hoffman et al. NUCLEIC ACIDS RESEARCH
- Mapping and analysis of chromatin state dynamics in nine human cell types
- (2011) Jason Ernst et al. NATURE
- Discover regulatory DNA elements using chromatin signatures and artificial neural network
- (2010) Hiram A. Firpi et al. BIOINFORMATICS
- An Atlas of Combinatorial Transcriptional Regulation in Mouse and Man
- (2010) Timothy Ravasi et al. CELL
- High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells
- (2010) A. P. Boyle et al. GENOME RESEARCH
- Enhancers make non-coding RNA
- (2010) Bing Ren NATURE
- Discovery and characterization of chromatin states for systematic annotation of the human genome
- (2010) Jason Ernst et al. NATURE BIOTECHNOLOGY
- The NIH Roadmap Epigenomics Mapping Consortium
- (2010) Bradley E Bernstein et al. NATURE BIOTECHNOLOGY
- Genome-wide Mapping of HATs and HDACs Reveals Distinct Functions in Active and Inactive Genes
- (2009) Zhibin Wang et al. CELL
- Finding distal regulatory elements in the human genome
- (2009) Nathaniel D Heintzman et al. CURRENT OPINION IN GENETICS & DEVELOPMENT
- Finding Significant Matches of Position Weight Matrices in Linear Time
- (2009) Cinzia Pizzi et al. IEEE-ACM Transactions on Computational Biology and Bioinformatics
- ChIP-seq accurately predicts tissue-specific activity of enhancers
- (2009) Axel Visel et al. NATURE
- Ultraconservation identifies a small subset of extremely constrained developmental enhancers
- (2008) Axel Visel et al. NATURE GENETICS
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now