RiceXPro Version 3.0: expanding the informatics resource for rice transcriptome

Rice functional genomics research: Progress and implications for crop genetic improvement

(2011) Yunhe Jiang et al.   BIOTECHNOLOGY ADVANCES

Field transcriptome revealed critical developmental and physiological transitions involved in the expression of growth potential in japonica rice

(2011) Yutaka Sato et al.   BMC PLANT BIOLOGY

PLEXdb: gene expression resources for plants and plant pathogens

(2011) S. Dash et al.   NUCLEIC ACIDS RESEARCH

Rice TOGO Browser: A Platform to Retrieve Integrated Information on Rice Functional and Applied Genomics

(2011) Yoshiaki Nagamura et al.   PLANT AND CELL PHYSIOLOGY

Genome-wide transcriptome dissection of the rice root system: implications for developmental and physiological functions

(2011) Hinako Takehisa et al.   PLANT JOURNAL

ArrayExpress update--an archive of microarray and high-throughput sequencing-based functional genomics experiments

(2010) H. Parkinson et al.   NUCLEIC ACIDS RESEARCH

RiceXPro: a platform for monitoring gene expression in japonica rice grown under natural field conditions

(2010) Y. Sato et al.   NUCLEIC ACIDS RESEARCH

NCBI GEO: archive for functional genomics data sets--10 years on

(2010) T. Barrett et al.   NUCLEIC ACIDS RESEARCH

OryzaExpress: An Integrated Database of Gene Expression Networks and Omics Annotations in Rice

(2010) Kazuki Hamada et al.   PLANT AND CELL PHYSIOLOGY

A gene network for long-day flowering activates RFT1 encoding a mobile flowering signal in rice

(2009) R. Komiya et al.   DEVELOPMENT

The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water

(2009) Yoko Hattori et al.   NATURE

A transcriptome atlas of rice cell types uncovers cellular, functional and developmental hierarchies

(2009) Yuling Jiao et al.   NATURE GENETICS

SALAD database: a motif-based database of protein annotations for plant comparative genomics

(2009) Motohiro Mihara et al.   NUCLEIC ACIDS RESEARCH

A dynamic gene expression atlas covering the entire life cycle of rice

(2009) Lei Wang et al.   PLANT JOURNAL

RiceArrayNet: A Database for Correlating Gene Expression from Transcriptome Profiling, and Its Application to the Analysis of Coexpressed Genes in Rice

(2009) T.-H. Lee et al.   PLANT PHYSIOLOGY

In Brief

(2008)   NATURE REVIEWS MOLECULAR CELL BIOLOGY