A highly conserved protein of unknown function in Sinorhizobium meliloti affects sRNA regulation similar to Hfq

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti

(2010) Jan-Philip Schlüter et al.   BMC GENOMICS

Transcriptome profiling of a Sinorhizobium meliloti fadD mutant reveals the role of rhizobactin 1021 biosynthesis and regulation genes in the control of swarming

(2010) Joaquina Nogales et al.   BMC GENOMICS

The Sinorhizobium meliloti RNA chaperone Hfq influences central carbon metabolism and the symbiotic interaction with alfalfa

(2010) Omar Torres-Quesada et al.   BMC MICROBIOLOGY

The Tetrahymena Argonaute-Binding Protein Giw1p Directs a Mature Argonaute-siRNA Complex to the Nucleus

(2010) Tomoko Noto et al.   CELL

Crystal structure and ligand binding of the MID domain of a eukaryotic Argonaute protein

(2010) Andreas Boland et al.   EMBO REPORTS

The Heat Shock Protein YbeY Is Required for Optimal Activity of the 30S Ribosomal Subunit

(2010) A. Rasouly et al.   JOURNAL OF BACTERIOLOGY

The Sinorhizobium meliloti RNA Chaperone Hfq Mediates Symbiosis of S. meliloti and Alfalfa

(2010) L. Barra-Bily et al.   JOURNAL OF BACTERIOLOGY

Proteomic Alterations Explain Phenotypic Changes in Sinorhizobium meliloti Lacking the RNA Chaperone Hfq

(2010) L. Barra-Bily et al.   JOURNAL OF BACTERIOLOGY

Role of Escherichia coli YbeY, a highly conserved protein, in rRNA processing

(2010) Bryan W. Davies et al.   MOLECULAR MICROBIOLOGY

Role of theSinorhizobium melilotiGlobal Regulator Hfq in Gene Regulation and Symbiosis

(2010) Mengsheng Gao et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Allosteric regulation of Argonaute proteins by miRNAs

(2010) Sergej Djuranovic et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Dali server: conservation mapping in 3D

(2010) Liisa Holm et al.   NUCLEIC ACIDS RESEARCH

The regulatory protein RraA modulates RNA-binding and helicase activities of the E. coli RNA degradosome

(2010) M. W. Gorna et al.   RNA

RNase R is a highly unstable protein regulated by growth phase and stress

(2010) C. Chen et al.   RNA

MicroRNA–Directed siRNA Biogenesis in Caenorhabditis elegans

(2010) Régis L. Corrêa et al.   PLoS Genetics

Regulatory RNAs in Bacteria

(2009) Lauren S. Waters et al.   CELL

Structural and functional modules in RNA interference

(2009) Marcin Nowotny et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

YbeY, a Heat Shock Protein Involved in Translation in Escherichia coli

(2009) A. Rasouly et al.   JOURNAL OF BACTERIOLOGY

Enhancement of the Seed-Target Recognition Step in RNA Silencing by a PIWI/MID Domain Protein

(2009) James S. Parker et al.   MOLECULAR CELL

Rapid cleavage of RNA by RNase E in the absence of 5′ monophosphate stimulation

(2009) Louise Kime et al.   MOLECULAR MICROBIOLOGY

Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation

(2009) Verena Pfeiffer et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structure of Escherichia coli Hfq bound to polyriboadenylate RNA

(2009) T. M. Link et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Redundant and Specific Roles of the ARGONAUTE Proteins AGO1 and ZLL in Development and Small RNA-Directed Gene Silencing

(2009) Allison C. Mallory et al.   PLoS Genetics

Molecular Determinants of a Symbiotic Chronic Infection

(2008) Katherine E. Gibson et al.   Annual Review of Genetics

Small RNA gene identification and mRNA target predictions in bacteria

(2008) C. Pichon et al.   BIOINFORMATICS

IntaRNA: efficient prediction of bacterial sRNA targets incorporating target site accessibility and seed regions

(2008) Anke Busch et al.   BIOINFORMATICS

Prediction of Sinorhizobium meliloti sRNA genes and experimental detection in strain 2011

(2008) Claudio Valverde et al.   BMC GENOMICS

Most mammalian mRNAs are conserved targets of microRNAs

(2008) R. C. Friedman et al.   GENOME RESEARCH

A rough guide to the non-coding RNA world ofSalmonella

(2008) Jörg Vogel   MOLECULAR MICROBIOLOGY

Redox Changes during the Legume–Rhizobium Symbiosis

(2008) Christine Chang et al.   Molecular Plant

Structure of an argonaute silencing complex with a seed-containing guide DNA and target RNA duplex

(2008) Yanli Wang et al.   NATURE

The 5′ end of two redundant sRNAs is involved in the regulation of multiple targets, including their own regulator

(2008) Maude Guillier et al.   NUCLEIC ACIDS RESEARCH

Silencing RNA-directed RNA polymerase 2 increases the susceptibility of Nicotiana attenuata to UV in the field and in the glasshouse

(2008) Shree P. Pandey et al.   PLANT JOURNAL

Herbivory-induced changes in the small-RNA transcriptome and phytohormone signaling in Nicotiana attenuata

(2008) S. P. Pandey et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The rpoS mRNA leader recruits Hfq to facilitate annealing with DsrA sRNA

(2008) T. J. Soper et al.   RNA

PNPase is a key player in the regulation of small RNAs that control the expression of outer membrane proteins

(2008) J. M. Andrade et al.   RNA