Transcriptomic and physiological characterization of thefefemutant of melon (Cucumis melo) reveals new aspects of iron-copper crosstalk

Iron deprivation results in a rapid but not sustained increase of the expression of genes involved in iron metabolism and sulfate uptake in tomato (Solanum lycopersicumL.) seedlings

(2013) Anna Rita Paolacci et al.   Journal of Integrative Plant Biology

The CTR/COPT-dependent copper uptake and SPL7-dependent copper deficiency responses are required for basal cadmium tolerance in A. thaliana

(2013) Sheena R. Gayomba et al.   Metallomics

Arabidopsis Copper Transport Protein COPT2 Participates in the Cross Talk between Iron Deficiency Responses and Low-Phosphate Signaling

(2013) A. Perea-Garcia et al.   PLANT PHYSIOLOGY

Rosette iron deficiency transcript and microRNA profiling reveals links between copper and iron homeostasis in Arabidopsis thaliana

(2012) Brian M. Waters et al.   JOURNAL OF EXPERIMENTAL BOTANY

Requirement and Functional Redundancy of Ib Subgroup bHLH Proteins for Iron Deficiency Responses and Uptake in Arabidopsis thaliana

(2012) Ning Wang et al.   Molecular Plant

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Fe Sparing and Fe Recycling Contribute to Increased Superoxide Dismutase Capacity in Iron-StarvedChlamydomonas reinhardtii

(2012) M. Dudley Page et al.   PLANT CELL

Transcriptome Sequencing Identifies SPL7-Regulated Copper Acquisition Genes FRO4/FRO5 and the Copper Dependence of Iron Homeostasis in Arabidopsis

(2012) M. Bernal et al.   PLANT CELL

Shoot to root communication is necessary to control the expression of iron-acquisition genes in Strategy I plants

(2012) María J. García et al.   PLANTA

Arabidopsis bHLH100 and bHLH101 Control Iron Homeostasis via a FIT-Independent Pathway

(2012) Alicia B. Sivitz et al.   PLoS One

Natural Variation at the FRD3 MATE Transporter Locus Reveals Cross-Talk between Fe Homeostasis and Zn Tolerance in Arabidopsis thaliana

(2012) Christophe Pineau et al.   PLoS Genetics

Use of natural variation reveals core genes in the transcriptome of iron-deficient Arabidopsis thaliana roots

(2011) Ricardo J. Stein et al.   JOURNAL OF EXPERIMENTAL BOTANY

Fitting into the Harsh Reality: Regulation of Iron-deficiency Responses in Dicotyledonous Plants

(2011) Rumen Ivanov et al.   Molecular Plant

Natural variation in iron use efficiency and mineral remobilization in cucumber (Cucumis sativus)

(2011) Brian M. Waters et al.   PLANT AND SOIL

Proteasome-mediated turnover of the transcriptional activator FIT is required for plant iron-deficiency responses

(2011) Alicia Sivitz et al.   PLANT JOURNAL

Spatiotemporal Analysis of Copper Homeostasis in Populus trichocarpa Reveals an Integrated Molecular Remodeling for a Preferential Allocation of Copper to Plastocyanin in the Chloroplasts of Developing Leaves

(2011) K. Ravet et al.   PLANT PHYSIOLOGY

Posttranslational Regulation of the Iron Deficiency Basic Helix-Loop-Helix Transcription Factor FIT Is Affected by Iron and Nitric Oxide

(2011) J. Meiser et al.   PLANT PHYSIOLOGY

Members of a small family of nodulin-like genes are regulated under iron deficiency in roots of Arabidopsis thaliana

(2011) Julia Gollhofer et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Gene expression profiling analysis of copper homeostasis in Arabidopsis thaliana

(2010) Talía del Pozo et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

The biogenesis and physiological function of chloroplast superoxide dismutases

(2010) Marinus Pilon et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Genome-wide BAC-end sequencing of Cucumis melo using two BAC libraries

(2010) Víctor M González et al.   BMC GENOMICS

Ethylene and nitric oxide involvement in the up-regulation of key genes related to iron acquisition and homeostasis in Arabidopsis

(2010) María J. García et al.   JOURNAL OF EXPERIMENTAL BOTANY

The bHLH Transcription Factor POPEYE Regulates Response to Iron Deficiency in Arabidopsis Roots

(2010) T. A. Long et al.   PLANT CELL

Transcriptional Profiling of the Arabidopsis Iron Deficiency Response Reveals Conserved Transition Metal Homeostasis Networks

(2010) T. J. W. Yang et al.   PLANT PHYSIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Early iron-deficiency-induced transcriptional changes in Arabidopsis roots as revealed by microarray analyses

(2009) Thomas J Buckhout et al.   BMC GENOMICS

Physiological functions of mineral micronutrients (Cu, Zn, Mn, Fe, Ni, Mo, B, Cl)

(2009) Robert Hänsch et al.   CURRENT OPINION IN PLANT BIOLOGY

The genome of the cucumber, Cucumis sativus L.

(2009) Sanwen Huang et al.   NATURE GENETICS

Copper homeostasis

(2009) Jason L. Burkhead et al.   NEW PHYTOLOGIST

SQUAMOSA Promoter Binding Protein-Like7 Is a Central Regulator for Copper Homeostasis in Arabidopsis

(2009) H. Yamasaki et al.   PLANT CELL

The Analysis of Arabidopsis Nicotianamine Synthase Mutants Reveals Functions for Nicotianamine in Seed Iron Loading and Iron Deficiency Responses

(2009) M. Klatte et al.   PLANT PHYSIOLOGY

Metal movement within the plant: contribution of nicotianamine and yellow stripe 1-like transporters

(2008) Catherine Curie et al.   ANNALS OF BOTANY

FIT interacts with AtbHLH38 and AtbHLH39 in regulating iron uptake gene expression for iron homeostasis in Arabidopsis

(2008) Youxi Yuan et al.   CELL RESEARCH

MicroRNA-mediated Systemic Down-regulation of Copper Protein Expression in Response to Low Copper Availability inArabidopsis

(2008) Salah E. Abdel-Ghany et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Heterocomplex of Iron Superoxide Dismutases Defends Chloroplast Nucleoids against Oxidative Stress and Is Essential for Chloroplast Development in Arabidopsis

(2008) F. Myouga et al.   PLANT CELL

Cell Identity Mediates the Response of Arabidopsis Roots to Abiotic Stress

(2008) J. R. Dinneny et al.   SCIENCE