Using transmission electron microscopy and 3View to determine collagen fibril size and three-dimensional organization

Elastic volume reconstruction from series of ultra-thin microscopy sections

(2012) Stephan Saalfeld et al.   NATURE METHODS

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

High-contrast en bloc staining of neuronal tissue for field emission scanning electron microscopy

(2012) Juan Carlos Tapia et al.   Nature Protocols

Tenocyte contraction induces crimp formation in tendon-like tissue

(2011) Andreas Herchenhan et al.   Biomechanics and Modeling in Mechanobiology

Volume electron microscopy for neuronal circuit reconstruction

(2011) Kevin L Briggman et al.   CURRENT OPINION IN NEUROBIOLOGY

Slow stretching that mimics embryonic growth rate stimulates structural and mechanical development of tendon-like tissue in vitro

(2011) Nicholas S. Kalson et al.   DEVELOPMENTAL DYNAMICS

3D segmentation of SBFSEM images of neuropil by a graphical model over supervoxel boundaries

(2011) Bjoern Andres et al.   MEDICAL IMAGE ANALYSIS

Wiring specificity in the direction-selectivity circuit of the retina

(2011) Kevin L. Briggman et al.   NATURE

Cadherin-9 Regulates Synapse-Specific Differentiation in the Developing Hippocampus

(2011) Megan E. Williams et al.   NEURON

As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets

(2010) S. Saalfeld et al.   BIOINFORMATICS

Role of elastin anisotropy in structural strain energy functions of arterial tissue

(2010) R. Rezakhaniha et al.   Biomechanics and Modeling in Mechanobiology

Growth of Collagen Fibril Seeds from Embryonic Tendon: Fractured Fibril Ends Nucleate New Tip Growth

(2010) David F. Holmes et al.   JOURNAL OF MOLECULAR BIOLOGY

Tissue section AFM: In situ ultrastructural imaging of native biomolecules

(2010) Helen K. Graham et al.   MATRIX BIOLOGY

The Cellular Biology of Flexor Tendon Adhesion Formation

(2009) Jason K.F. Wong et al.   AMERICAN JOURNAL OF PATHOLOGY

Revealing the high-resolution three-dimensional network of chromatin and interchromatin space: A novel electron-microscopic approach to reconstructing nuclear architecture

(2009) Jacques Rouquette et al.   CHROMOSOME RESEARCH

Electron microscope 3D reconstruction of branched collagen fibrilsin vivo

(2009) T. Starborg et al.   SCANDINAVIAN JOURNAL OF MEDICINE & SCIENCE IN SPORTS

Serial Section Scanning Electron Microscopy of Adult Brain Tissue Using Focused Ion Beam Milling

(2008) G. Knott et al.   JOURNAL OF NEUROSCIENCE

Tension is required for fibripositor formation

(2008) Z KAPACEE et al.   MATRIX BIOLOGY