HepatoNet1: a comprehensive metabolic reconstruction of the human hepatocyte for the analysis of liver physiology

Identifying essential genes in bacterial metabolic networks with machine learning methods

(2010) Kitiporn Plaimas et al.   BMC Systems Biology

A global view of protein expression in human cells, tissues, and organs

(2009) Fredrik Pontén et al.   Molecular Systems Biology

Genome-scale gene/reaction essentiality and synthetic lethality analysis

(2009) Patrick F Suthers et al.   Molecular Systems Biology

Construction of a Biological Tissue Model Based on a Single-Cell Model: A Computer Simulation of Metabolic Heterogeneity in the Liver Lobule

(2008) Hiroshi Ohno et al.   ARTIFICIAL LIFE

Detection of stoichiometric inconsistencies in biomolecular models

(2008) A. Gevorgyan et al.   BIOINFORMATICS

Group Contribution Method for Thermodynamic Analysis of Complex Metabolic Networks

(2008) Matthew D. Jankowski et al.   BIOPHYSICAL JOURNAL

On the Potential for Integrating Gene Expression and Metabolic Flux Data

(2008) Meric Ovacik et al.   Current Bioinformatics

Human metabolic network reconstruction and its impact on drug discovery and development

(2008) Hongwu Ma et al.   DRUG DISCOVERY TODAY

Network-based prediction of human tissue-specific metabolism

(2008) Tomer Shlomi et al.   NATURE BIOTECHNOLOGY

The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli

(2008) Adam M Feist et al.   NATURE BIOTECHNOLOGY

TarO: a target optimisation system for structural biology

(2008) I. M. Overton et al.   NUCLEIC ACIDS RESEARCH

Ensembl 2009

(2008) T. J. P. Hubbard et al.   NUCLEIC ACIDS RESEARCH

BRENDA, AMENDA and FRENDA the enzyme information system: new content and tools in 2009

(2008) A. Chang et al.   NUCLEIC ACIDS RESEARCH

Reactome knowledgebase of human biological pathways and processes

(2008) L. Matthews et al.   NUCLEIC ACIDS RESEARCH

NCBI GEO: archive for high-throughput functional genomic data

(2008) T. Barrett et al.   NUCLEIC ACIDS RESEARCH

Structural robustness of metabolic networks with respect to multiple knockouts

(2007) Jörn Behre et al.   JOURNAL OF THEORETICAL BIOLOGY