Review
Plant Sciences
Saskya E. Carrera-Pacheco, Ben Hankamer, Melanie Oey
Summary: Microalgal chloroplasts, particularly those of C. reinhardtii, show promise as a new platform for recombinant protein production. Optimizing transgene expression and protein yields involves considering both environmental and cellular factors. This review focuses on the regulatory effects of environmental factors such as light, carbon source, and temperature on biomass and recombinant protein production, with implications for large-scale light-driven biotechnology applications.
TRENDS IN PLANT SCIENCE
(2023)
Article
Biochemistry & Molecular Biology
Ashish K. Maurya, Piali Sengupta
Summary: The paper introduces a novel cilia regulator called XBX-4, which modulates the CCRK and MAK kinase pathway in C. elegans. Mutations associated with Joubert syndrome in the XBX-4 DUF3719 domain also result in cilia elongation.
Article
Multidisciplinary Sciences
Tomokazu Kurita, Masako Iwai, Keishi Moroi, Kumiko Okazaki, Seiji Nomura, Fumihiko Saito, Shinichiro Maeda, Akihide Takami, Atsushi Sakamoto, Hiroyuki Ohta, Tetsushi Sakuma, Takashi Yamamoto
Summary: Algal lipids, produced through photosynthesis and carbon dioxide assimilation, are expected to be the basis for sustainable fuels. However, the use of genetically modified organisms (GMOs) in outdoor culture is restricted. Recent research has discovered that plasmids containing yeast centromere and autonomous replication sequence can behave as episomes in Nannochloropsis species. This study aims to develop a genome editing system that allows the removal of expression vectors after introducing mutations, thereby creating mutated Nannochloropsis without any transgenes.
SCIENTIFIC REPORTS
(2022)
Review
Oncology
Suhui Yang, Chanel Jackson, Eduard Karapetyan, Pranabananda Dutta, Dulcie Kermah, Yong Wu, Yanyuan Wu, John Schloss, Jaydutt V. Vadgama
Summary: Triple-negative breast cancer (TNBC) is the most aggressive subtype of breast cancer with poor prognosis, while protein disulfide isomerase (PDI) has been identified as a potential therapeutic target due to its role in tumor progression. Selective blockade of PDI can induce apoptosis through sustained activation of UPR pathways. Future research should focus on the roles of PDI in highly metastatic breast cancers like TNBC.
Article
Multidisciplinary Sciences
Zihui Huang, Liangliang Shen, Wenda Wang, Zhiyuan Mao, Xiaohan Yi, Tingyun Kuang, Jian-Ren Shen, Xing Zhang, Guangye Han
Summary: Photosystems I and II undergo state transitions to balance light energy distribution and optimize photosynthesis, with the cryo-EM structure of a PSI-LHCI-LHCII supercomplex from C. reinhardtii revealing subunit organization and energy transfer pathways.
NATURE COMMUNICATIONS
(2021)
Article
Biochemistry & Molecular Biology
Pingyu Yan, Zhiyuan Zou, Shiyao Zhang, Rui Wang, Tingting Niu, Xia Zhang, Defu Liu, Xuejie Zhou, Alan K. Chang, Nathaniel G. N. Milton, Gary W. Jones, Jianwei He
Summary: The study investigated the binding between Pichia pastoris PDI and amyloidogenic proteins, revealing multiple binding modes between PDI and its substrates, suggesting different specificities and affinities. PDI may eliminate the need for misfolded proteins to be localized in ER-associated compartments by promoting protein folding.
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
(2021)
Article
Cell Biology
Kangkai Xia, Shujing Li, Yuxi Yang, Xiaoxia Shi, Binggong Zhao, Linlin Lv, Zhiqiang Xin, Jie Kang, Ping Ren, Huijian Wu
Summary: Breast cancer is a global health issue with rising incidence. Disruption of the internal circadian clock, including the genetic dysregulation of Cry2, can contribute to the development of diseases, such as tumors. This study focuses on understanding the post-translational modifications of Cry2 and its role in breast cancer pathogenesis.
CELL DEATH & DISEASE
(2023)
Article
Cell Biology
Sabrina Klemz, Thomas Wallach, Sandra Korge, Mechthild Rosing, Roman Klemz, Bert Maier, Nicholas C. Fiorenza, Irem Kaymak, Anna K. Fritzsche, Erik D. Herzog, Ralf Stanewsky, Achim Kramer
Summary: In organisms with circadian clocks, the post-translational modifications of clock proteins, particularly phosphorylation, play a crucial role in controlling circadian rhythms. Protein phosphatase 4 (PPP4) and its regulatory subunit PPP4R2 have been identified as critical components in mammals and Drosophila, affecting the circadian system by regulating phosphorylation and transactivation activity of CLOCK/BMAL1.
GENES & DEVELOPMENT
(2021)
Editorial Material
Cell Biology
Ueli Schibler
Summary: Mammalian body cells have cell-autonomous and self-sustained circadian oscillators relying on delayed negative feedback loops in gene expression. Transcriptional activation and repression, as well as post-translational mechanisms like phosphorylation and dephosphorylation, play crucial roles in setting the pace of these timekeepers. The study by Klemz and colleagues in Genes & Development demonstrates how dephosphorylation of BMAL1 by protein phosphatase 4 (PPP4) participates in the modulation of circadian timing.
GENES & DEVELOPMENT
(2021)
Article
Biochemistry & Molecular Biology
Renato Simoes Gaspar, Jonathan M. Gibbins
Summary: Protein disulfide isomerase (PDI) and sibling proteins play essential roles in thrombus formation by influencing protein folding and function at the cell surface. Thiol isomerase targets have been identified, demonstrating their significance in regulating thrombosis.
ANTIOXIDANTS & REDOX SIGNALING
(2021)
Article
Plant Sciences
Shun Tamaki, Kazunari Ozasa, Toshihisa Nomura, Marumi Ishikawa, Koji Yamada, Kengo Suzuki, Keiichi Mochida
Summary: Zeaxanthin is required for the formation of functional photoreactive organelles in Euglena gracilis, highlighting the evolutionary differences between euglenophytes and chlorophytes in the photosensing mechanism. The study demonstrates the metabolic regulation of photoreactive organelle formation in Euglena gracilis and its importance in eyespot formation.
Article
Biochemistry & Molecular Biology
Mirva J. Saaranen, Heli Alanen, Kirsi E. H. Salo, Emmanuel Nji, Pekka Karkkainen, Constanze Schmotz, Lloyd W. Ruddock
Summary: Proteins in the thioredoxin superfamily, such as protein disulfide isomerase (PDI) and glutaredoxins, have similar structures and catalytic mechanisms. PDI uses glutathione for oxidation/reduction in vitro, while glutaredoxins have a high affinity for glutathione. Mutating the active site of PDI to a more glutaredoxin-like motif increases its reactivity with glutathione.
Article
Biochemistry & Molecular Biology
Abdul Burhan Khan, Urfi Siddiqui, Sana Fatima, Ahmed Abdur Rehman, Mohamad Aman Jairajpuri
Summary: Current antithrombotic drugs have drawbacks, prompting the search for new and cheaper alternatives. This study found that naringin has high binding affinity for PDI, altering its conformation and activity, and thereby affecting blood coagulation rates.
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES
(2023)
Article
Chemistry, Analytical
Ying-Jie Tang, Shan He, Xiao-Feng Guo, Hong Wang
Summary: The endoplasmic reticulum (ER) is a critical organelle in cells involved in protein synthesis, folding, and transport, with redox balance being essential for its normal function. A newly designed fluorescent probe N-Se showed selective and rapid response to ClO- with reversible detection capability, allowing real-time monitoring of redox status in the ER through changes in fluorescence intensity.
Article
Biochemistry & Molecular Biology
Nittaya Suwannachuen, Kantinan Leetanasaksakul, Sittiruk Roytrakul, Narumon Phaonakrop, Siriwan Thaisakun, Peerapat Roongsattham, Chatchawan Jantasuriyarat, Nuttha Sanevas, Anchalee Sirikhachornkit
Summary: Photosynthetic organisms need light to survive, but excessive light can produce reactive oxygen species (ROS) and cause cell damage or death. Studying plants' responses to light can improve their growth and productivity. This study compared the responses of two field isolates of Chlamydomonas to high light stress and found that the light-tolerant strain managed ROS better and utilized palmelloid formation and cell aggregation to protect cells from excessive light.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)