Comparative transcriptome analysis of TUCPs in Gossypium hirsutum Ligon-lintless-1 mutant and their proposed functions in cotton fiber development

Genetic dissection of the fuzzless seed trait in Gossypium barbadense

(2018) Qian-Hao Zhu et al.   JOURNAL OF EXPERIMENTAL BOTANY

A Gly65Val substitution in an actin, GhACT_LI1, disrupts cell polarity and F-actin organization resulting in dwarf, lintless cotton plants

(2017) Gregory N. Thyssen et al.   PLANT JOURNAL

Genome-wide characterization and expression analysis of MYB transcription factors in Gossypium hirsutum

(2016) Haron Salih et al.   BMC GENETICS

AnnoLnc: a web server for systematically annotating novel human lncRNAs

(2016) Mei Hou et al.   BMC GENOMICS

Genome-wide identification, phylogeny, and expression analysis of pectin methylesterases reveal their major role in cotton fiber development

(2016) Weijie Li et al.   BMC GENOMICS

COTIP: Cotton TILLING Platform, a Resource for Plant Improvement and Reverse Genetic Studies

(2016) Usman Aslam et al.   Frontiers in Plant Science

Integrative transcriptome, proteome, phosphoproteome and genetic mapping reveals new aspects in a fiberless mutant of cotton

(2016) Qi-Feng Ma et al.   Scientific Reports

GhLTPG1, a cotton GPI-anchored lipid transfer protein, regulates the transport of phosphatidylinositol monophosphates and cotton fiber elongation

(2016) Ting Deng et al.   Scientific Reports

Neighboring Genes Show Correlated Evolution in Gene Expression

(2015) Avazeh T. Ghanbarian et al.   MOLECULAR BIOLOGY AND EVOLUTION

Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement

(2015) Tianzhen Zhang et al.   NATURE BIOTECHNOLOGY

Transcriptome Analysis of Short Fiber Mutant Ligon lintless-1 (Li1) Reveals Critical Genes and Key Pathways in Cotton Fiber Elongation and Leaf Development

(2015) Wenhua Liang et al.   PLoS One

Quantitative phosphoproteomic profiling of fiber differentiation and initiation in a fiberless mutant of cotton

(2014) Qifeng Ma et al.   BMC GENOMICS

Evolutionary dynamics and tissue specificity of human long noncoding RNAs in six mammals

(2014) S. Washietl et al.   GENOME RESEARCH

Comparative Transcriptome Analysis of Short Fiber Mutants Ligon-Lintless 1 And 2 Reveals Common Mechanisms Pertinent to Fiber Elongation in Cotton (Gossypium hirsutum L.)

(2014) Matthew K. Gilbert et al.   PLoS One

Genome-Wide Transcriptome Profiling Revealed Cotton Fuzz Fiber Development Having a Similar Molecular Model as Arabidopsis Trichome

(2014) Qun Wan et al.   PLoS One

Next generation genetic mapping of the Ligon-lintless-2 (Li 2) locus in upland cotton (Gossypium hirsutum L.)

(2014) Gregory N. Thyssen et al.   THEORETICAL AND APPLIED GENETICS

Transcript profiling by microarray and marker analysis of the short cotton (Gossypium hirsutum L.) fiber mutant Ligon lintless-1 (Li1)

(2013) Matthew K Gilbert et al.   BMC GENOMICS

Gene expression profile analysis of Ligon lintless-1 (Li1) mutant reveals important genes and pathways in cotton leaf and fiber development

(2013) Mingquan Ding et al.   GENE

lncRNome: a comprehensive knowledgebase of human long noncoding RNAs

(2013) Deeksha Bhartiya et al.   Database-The Journal of Biological Databases and Curation

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Transcriptome analysis reveals critical genes and key pathways for early cotton fiber elongation in Ligon lintless-1 mutant

(2012) Kang Liu et al.   GENOMICS

In vitro induction of mutation in cotton (Gossypium hirsutum L.) and isolation of mutants with improved yield and fiber characters

(2011) Annamalai Muthusamy et al.   ACTA PHYSIOLOGIAE PLANTARUM

Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

(2011) M. N. Cabili et al.   GENES & DEVELOPMENT

Aberrant Expression of Critical Genes during Secondary Cell Wall Biogenesis in a Cotton Mutant, Ligon Lintless-1 (Li-1)

(2010) James J. Bolton et al.   COMPARATIVE AND FUNCTIONAL GENOMICS

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

(2010) Cole Trapnell et al.   NATURE BIOTECHNOLOGY

Small Peptides Switch the Transcriptional Activity of Shavenbaby During Drosophila Embryogenesis

(2010) T. Kondo et al.   SCIENCE

Proteomic Identification of Differentially Expressed Proteins in theLigon lintlessMutant of Upland Cotton (Gossypium hirsutumL.)

(2009) Pi-Ming Zhao et al.   JOURNAL OF PROTEOME RESEARCH

The Pfam protein families database

(2009) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Global analysis of gene expression in cotton fibers from wild and domesticatedGossypium barbadense

(2008) Bhupendra Chaudhary et al.   EVOLUTION & DEVELOPMENT