Article
Biochemistry & Molecular Biology
Milosz Rolinski, Nicola Pietro Montaldo, Merdane Ezgi Aksu, Sarah L. Fordyce Martin, Alessandro Brambilla, Nicolas Kunath, Jostein Johansen, Sten Even Erlandsen, Nina-Beate Liabbak, Kristin Rian, Magnar Bjoras, Pal Saetrom, Barbara van Loon
Summary: The research identified a novel mechanism of alkylation stress response dependent on MED13 and cyclin D1, which can serve as a basis for developing innovative therapeutic strategies.
NUCLEIC ACIDS RESEARCH
(2021)
Article
Biology
Zijie Cai, Jingru Wang, Yudong Li, Qianfeng Shi, Liang Jin, Shunying Li, Mengdi Zhu, Qi Wang, Lok Lam Wong, Wang Yang, Hongna Lai, Chang Gong, Yandan Yao, Yujie Liu, Jun Zhang, Herui Yao, Qiang Liu
Summary: CDK4/6 inhibitors are standard treatment for advanced HR+/HER2- breast cancer, but resistance is inevitable. This study found that overexpression of Cyclin D1 and CDK4 proteins leads to resistance, and targeting the PI3K/mTOR pathway can restore sensitivity.
SCIENCE CHINA-LIFE SCIENCES
(2023)
Article
Cell Biology
Dong Woo Kang, Won Chan Hwang, Yu Na Noh, Youra Kang, Younghoon Jang, Jung-Ae Kim, Do Sik Min
Summary: Phospholipase D1 (PLD1) is identified as a transcriptional target of histone deacetylase (HDAC) inhibitors and contributes to drug resistance in GBM. Inhibiting PLD1 can enhance the efficacy of HDAC inhibitors in treating GBM.
JOURNAL OF CELLULAR PHYSIOLOGY
(2021)
Article
Engineering, Biomedical
Xuanzhe Liu, Yuange Li, Shuo Wang, Mingkuan Lu, Jian Zou, Zhongmin Shi, Binbin Xu, Wei Wang, Bo Hu, Tuo Jin, Fei Wu, Shen Liu, Cunyi Fan
Summary: This study investigates the use of a PDGF-loaded microneedle patch for enhancing tendon healing through angiogenesis. The results showed enhanced tendon healing quality and improved biomechanical properties, along with the involvement of the MAPK/p38/Cyclin D1 pathway and angiogenesis in the healing process.
MATERIALS TODAY BIO
(2022)
Article
Medicine, Research & Experimental
Shuangting Li, Diancan Wang, Xuan Zheng, Yi Li, Chong Ding, Meng Wang, Xuejun Ge, Jiuhui Jiang, Yan Qiao, Yixiang Wang
Summary: Malignant melanoma, an aggressive and lethal skin cancer, lacks effective treatment methods. This study demonstrated the essential role of glucose in melanoma proliferation and identified a drug combination of niclosamide and quinacrine that could inhibit melanoma growth and glucose intake. The mechanism of action was found to involve the suppression of the Akt pathway and the inhibition of the key enzyme HK2 in glucose metabolism. The decrease of HK2 further inhibited cyclin D1 and melanoma cell proliferation. Overall, this research provides evidence for a potential anti-melanoma strategy based on drug-induced glucose deprivation.
BIOMEDICINE & PHARMACOTHERAPY
(2023)
Article
Microbiology
Beatriz Merchel Piovesan Pereira, Muhammad Adil Salim, Navneet Rai, Ilias Tagkopoulos
Summary: The study found that bacteria strains evolved through adaptive laboratory evolution show improved survival in the biocide due to mutations in the activator yqhC, leading to overexpression of the yqhD aldehyde reductase gene. This protection mechanism is specific to yqhD and not offered by other aldehyde reductase genes in E. coli.
FRONTIERS IN MICROBIOLOGY
(2021)
Article
Medicine, Research & Experimental
Swathi Karthikeyan, Ian G. Waters, Lauren Dennison, David Chu, Joshua Donaldson, Dong Ho Shin, D. Marc Rosen, Paula I. Gonzalez-Ericsson, Violeta Sanchez, Melinda E. Sanders, Morgan V. Pantone, Riley E. Bergman, Brad A. Davidson, Sarah C. Reed, Daniel J. Zabransky, Karen Cravero, Kelly Kyker-Snowman, Berry Button, Hong Yuen Wong, Paula J. Hurley, Sarah Croessmann, Ben Ho Park
Summary: Intratumor heterogeneity plays a crucial role in determining the poor outcomes of many cancers, including breast cancer. This study reveals that oncogenic PIK3CA mutant cells can induce the proliferation of quiescent HER2 mutant cells through a cell contact-mediated mechanism, leading to HER2 cells becoming the major subclone over PIK3CA counterparts. The findings highlight the nonrandom subclonal architecture of heterogenous tumors and may provide insights into tumor evolution for future personalized medicine strategies.
JOURNAL OF CLINICAL INVESTIGATION
(2021)
Article
Cell Biology
Luyao Ma, Yeteng Tian, Tao Qian, Wenjun Li, Chengmin Liu, Bizhu Chu, Qian Kong, Renwei Cai, Panzhu Bai, Lisha Ma, Yi Deng, Ruijun Tian, Chuanyue Wu, Ying Sun
Summary: Kindlin-2 is found to be crucial for promoting AR signaling and breast cancer progression. It physically associates with AR and Src, forming a complex that facilitates Src-mediated AR Tyr-534 phosphorylation and signaling, leading to enhanced breast cancer cell proliferation and migration. Depletion of Kindlin-2 suppresses AR signaling, resulting in diminished breast cancer progression.
CELL DEATH & DISEASE
(2022)
Article
Biochemistry & Molecular Biology
Yang-Liu Song, Ming-Hui Yang, Si Zhang, Hao Wang, Kun-Lun Kai, Chun-Xia Yao, Fei-Fei Dai, Meng-Jiao Zhou, Jin-Biao Li, Zhi-Ru Wei, Zhongnan Yin, Wei-Guo Zhu, Lixiang Xue, Ming-Xi Zang
Summary: This study reveals that GATA-4 acts as a molecular switch for the regulation of miR-29a expression. It recruits polycomb group proteins like EZH2 to negatively regulate miR-29a in undifferentiated C2C12 myoblast cells. In poorly differentiated rhabdomyosarcoma cells, EZH2 still binds to the miR-29a promoter with GATA-4 to mediate transcriptional repression of miR-29a. However, during re-differentiation of rhabdomyosarcoma cells, EZH2 is displaced from the miR-29a promoter, leading to the activation of miR-29a and promoting myogenic differentiation.
Article
Cell Biology
Yilin Fan, Tobias Meyer
Summary: Cell density and mitogen signals compete to regulate the levels of cyclin D1 and p27, determining whether cells proliferate or enter quiescence. The history of competing signals experienced by mother cells is funneled into a precise activator-inhibitor balance that controls the fate of daughter cells.
Article
Medicine, Research & Experimental
Qian Zhong, Ying Xiong, Chen Ling, Yanping Qian, Xia Zhao, Hanshuo Yang
Summary: miR-20b down-regulates cyclin D1, increases sensitivity of ovarian cancer cells to olaparib, reduces expression of RAD51 and induces cell cycle arrest in G0/G1 phase. Ovarian cancer patients with higher expression of miR-20b have significantly longer progression-free survival.
EXPERIMENTAL BIOLOGY AND MEDICINE
(2021)
Article
Biochemistry & Molecular Biology
Francesca Giordano, Maria D'Amico, Francesca Ida Montalto, Rocco Malivindi, Adele Chimento, Francesca Luisa Conforti, Vincenzo Pezzi, Maria Luisa Panno, Sebastiano Ando, Francesca De Amicis
Summary: Glioblastoma multiforme (GBM) is an aggressive cancer type with poor outcomes, and enrichment of GBM stem cells (GSCs) is believed to be the cause of its recurrence and chemoresistance. In this study, low-dose treatment of γ-secretase inhibitor RO4929097 (GSI) and resveratrol (RSV) reversed the mesenchymal phenotype of GBM cells to an epithelial-like phenotype, affecting invasion and stemness. The mechanism involves cyclin D1, cyclin-dependent kinase (CDK4), and paxillin (Pxn) phosphorylation, leading to reduced Pxn interaction with vinculin (Vcl) and altered cell migration. The study suggests that targeting Cdk4 with Notch inhibitors and RSV could be a potential therapeutic strategy for aggressive brain tumors.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Chemistry, Analytical
Lixiao Liu, Anzi Yang, Wen Luo, Huaxiao Liu, Xuan Liu, Wenbo Zhao
Summary: The study successfully synthesized Bi2S3 QDs with excellent performance using the biomineralization method, and investigated their ECL characteristics and mechanisms for the first time. By using an ECL immunosensor for CCND1 detection, a wide detection range and extremely low detection limit were demonstrated.
Article
Oncology
Swapna Asuthkar, Sujatha Venkataraman, Janardhan Avilala, Katherine Shishido, Rajeev Vibhakar, Bethany Veo, Ian J. Purvis, Maheedhara R. Guda, Kiran K. Velpula
Summary: Medulloblastoma (MB) is the most common malignant pediatric brain tumor, and the standard of care for MB patients includes maximum safe resection, postoperative craniospinal irradiation, and chemotherapy. Recent research has identified SMYD3 as a crucial epigenetic regulator, which activates the transcription of cyclin D3 and drives the growth of Group 3 Myc+ MB cells.
Article
Cardiac & Cardiovascular Systems
Ekhtear Hossain, Yuan Li, Madhu B. Anand-Srivastava
Summary: In this study, the role of Sirt1 in ANG II-induced overexpression of Gi alpha proteins and hyperproliferation of aortic VSMCs was examined. It was found that ANG II treatment increased Sirt1 expression in VSMCs, which was attenuated by AT(1) and AT(2) receptor antagonists.
AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY
(2021)
Review
Biochemistry & Molecular Biology
Mandy B. Hulst, Thadee Grocholski, Jacques J. C. Neefjes, Gilles P. van Wezel, Mikko Metsa-Ketela
Summary: Doxorubicin, widely used in cancer treatment but limited by its severe side-effects, may be surpassed by new anthracycline-based drugs that focus on histone eviction activity to avoid cardiac toxicity. Recent advancements in biosynthesis and discovery of new congeners from rare Actinobacteria have laid the foundation for the development of novel anthracyclines.
NATURAL PRODUCT REPORTS
(2022)
Review
Cell Biology
Sabina Y. van der Zanden, Marlieke L. M. Jongsma, Anna C. M. Neefjes, Ilana Berlin, Jacques Neefjes
Summary: The nuclear envelope plays a crucial role in eukaryotic cells as a physical barrier and gate-keeper for selective transport between the nucleus and cytoplasm. During open mitosis, the nuclear envelope fragments to allow spindle formation and chromosome segregation, leading to mixing of nuclear and cytoplasmic soluble fractions. Recent studies have revealed the mechanisms behind the restoration of soluble proteome homeostasis following nuclear envelope reformation in daughter cells. This article provides an overview of how mitotic cells overcome this challenge to ensure continuity of cellular functions and discusses its implications for the proteasome, which functions in both the cytoplasmic and nuclear compartments.
TRENDS IN CELL BIOLOGY
(2023)
Article
Multidisciplinary Sciences
Dario Zimmerli, Chiara S. Brambillasca, Francien Talens, Jinhyuk Bhin, Renske Linstra, Lou Romanens, Arkajyoti Bhattacharya, Stacey E. P. Joosten, Ana Moises Da Silva, Nuno Padrao, Max D. Wellenstein, Kelly Kersten, Mart de Boo, Maurits Roorda, Linda Henneman, Roebi de Bruijn, Stefano Annunziato, Eline van der Burg, Anne Paulien Drenth, Catrin Lutz, Theresa Endres, Marieke van de Ven, Martin Eilers, Lodewyk Wessels, Karin E. de Visser, Wilbert Zwart, Rudolf S. N. Fehrmann, Marcel A. T. M. van Vugt, Jos Jonkers
Summary: MYC plays a crucial role in suppressing anti-tumour immunity in triple-negative breast cancer by directly regulating the transcription of interferon signalling genes. MYC overexpression decreases lymphocyte infiltration in tumors and prevents the recruitment and activation of immune cells. These findings reveal the mechanisms by which MYC overexpression leads to poor immunogenicity in triple-negative breast cancer.
NATURE COMMUNICATIONS
(2022)
Review
Cell Biology
Marlieke L. M. Jongsma, Nina Bakker, Jacques Neefjes
Summary: The endosomal system coordinates the transport of substances within cells, and its motion is regulated by microtubule-based motor proteins. These interactions determine the mobility of the endosomes.
JOURNAL OF CELL SCIENCE
(2023)
Article
Multidisciplinary Sciences
Olimpia Alessandra Buoninfante, Bas Pilzecker, Aldo Spanjaard, Daniel de Groot, Stefan Prekovic, Ji-Ying Song, Cor Lieftink, Matilda Ayidah, Colin E. J. Pritchard, Judith Vivie, Kathleen E. Mcgrath, Ivo J. Huijbers, Sjaak Philipsen, Marieke von Lindern, Wilbert Zwart, Roderick L. Beijersbergen, James Palish, Paul C. M. van den Berk, Heinz Jacobs
Summary: DNA damage poses a threat to genomic integrity and leads to stem cell failure. Cells use DNA damage tolerance (DDT), regulated by PCNA ubiquitination and REV1, to bypass genotoxic lesions during replication. While DDT is conserved in all domains of life, its relevance in mammals has been unclear. Our study demonstrates that inactivation of both PCNA ubiquitination and REV1 results in embryonic and adult lethality, as well as accumulation of DNA damage in hematopoietic stem and progenitor cells (HSPCs) which ultimately leads to their depletion. This highlights the crucial importance of DDT in the maintenance of stem cell compartments and mammalian life under unperturbed conditions.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2023)
Article
Multidisciplinary Sciences
Jeroen Kneppers, Tesa M. Severson, Joseph C. Siefert, Pieter Schol, Stacey E. P. Joosten, Ivan Pak Lok Yu, Chia-Chi Flora Huang, Tunc Morova, Umut Berkay Altintas, Claudia Giambartolomei, Ji-Heui Seo, Sylvan C. Baca, Isa Carneiro, Eldon Emberly, Bogdan Pasaniuc, Carmen Jeronimo, Rui Henrique, Matthew L. Freedman, Lodewyk F. A. Wessels, Nathan A. Lack, Andries M. Bergman, Wilbert Zwart
Summary: The chromatin binding of androgen receptor (AR) exhibits high heterogeneity in primary prostate tumors, which overlaps with the heterogeneity observed in healthy prostate epithelium. This heterogeneity has functional consequences, as somatic mutations occur commonly at AR sites that are shared in primary, but not metastatic tissues. Additionally, less frequently shared AR sites are strongly associated with AR-driven gene expression and can also differentiate patient outcomes.
NATURE COMMUNICATIONS
(2022)
Review
Cell Biology
Ilana Berlin, Aysegul Sapmaz, Virginie Stevenin, Jacques Neefjes
Summary: The endolysosomal system is a dynamic network of vesicles that sense and interpret environmental cues, leading to homeostasis. To integrate extracellular signals with intracellular processes, endosomes and lysosomes make decisions on fusion or fission, recycling or degradation, and transport or contact with other organelles. These decisions are regulated by reversible post-translational modifications (PTMs) involving ubiquitin (Ub) and ubiquitin-like (Ubl) proteins. This ubiquitylation cycle controls protein stability and behavior on the endolysosomal membranes, fine-tuning macromolecular complex assembly and function. Additionally, this system is exploited by intracellular bacteria to hijack host trafficking pathways for their own benefit.
JOURNAL OF CELL SCIENCE
(2023)
Article
Oncology
Floriane Racine, Christophe Louandre, Corinne Godin, Baptiste Chatelain, Stefan Prekovic, Wilbert Zwart, Antoine Galmiche, Zuzana Saidak
Summary: Human tumors often exhibit a hypercoagulant state that promotes vascular complications. The tumor coagulome, a repertoire of tumor-expressed genes that regulates coagulation and fibrinolysis, has been found to be linked with the tumor microenvironment. Glucocorticoids were discovered to regulate the coagulome through direct transcriptional and indirect effects, which have potential vascular consequences and impact on the tumor microenvironment.
Article
Oncology
Maaike Y. Kapteijn, Shanna Zwaan, Esther ter Linden, El Houari Laghmani, Rob F. P. van den Akker, Araci M. R. Rondon, Sabina Y. van der Zanden, Jacques Neefjes, Henri H. Versteeg, Jeroen T. Buijs
Summary: This study found a promoting role of the commonly used chemotherapeutic agents Temozolomide and Lomustine on tissue factor (TF) procoagulant activity and gene/protein expression in glioblastoma (GBM) cell lines. This may explain the increased risk of thrombosis in GBM patients undergoing chemotherapy. Therefore, GBM patients with high TF levels may benefit from anticoagulant treatment to decrease the risk of chemotherapy-induced thrombosis.
Article
Biochemistry & Molecular Biology
Dorien Clarisse, Stefan Prekovic, Philip Vlummens, Eleni Staessens, Karlien Van Wesemael, Jonathan Thommis, Daria Fijalkowska, Guillaume Acke, Wilbert Zwart, Ilse M. Beck, Fritz Offner, Karolien De Bosscher
Summary: The interaction between glucocorticoid receptor (GR) and mineralocorticoid receptor (MR) improves drug efficacy in multiple myeloma. Co-treatment of the GR agonist dexamethasone (Dex) with the MR antagonist spironolactone (Spi) enhances cell killing in myeloma, and this combination treatment affects the expression of prognosis-related genes and proteins in myeloma patients.
CELLULAR AND MOLECULAR LIFE SCIENCES
(2023)
Article
Oncology
Stefan Prekovic, Wilbert Zwart
JOURNAL OF CLINICAL ONCOLOGY
(2023)
Article
Biochemistry & Molecular Biology
Selcuk Yavuz, Helene Kabbech, Jente van Staalduinen, Simon Linder, Wiggert A. van Cappellen, Alex L. Nigg, Tsion E. Abraham, Johan A. Slotman, Marti Quevedo, Raymond A. Poot, Wilbert Zwart, Martin E. van Royen, Frank G. Grosveld, Ihor Smal, Adriaan B. Houtsmuller
Summary: This study reveals the formation of visible foci of androgen receptors (ARs) in the nucleus upon stimulation by testosterone, as well as the potential compartmentalization of these foci through liquid-liquid phase separation. Furthermore, it demonstrates the presence of AR-regulated genes within these foci.
NUCLEIC ACIDS RESEARCH
(2023)
Article
Biology
Seham Elabd, Eleonora Pauletto, Valeria Solozobova, Nils Eickhoff, Nuno Padrao, Wilbert Zwart, Christine Blattner
Summary: TRIM25 targets p300 for degradation by promoting its interaction with dynein, leading to the regulation of p300-dependent gene expression.
LIFE SCIENCE ALLIANCE
(2023)
Meeting Abstract
Oncology
Erika Fletcher, Iliana Kerzeli, Robert Cordfunke, Aikaterini Nasi, Gunilla Tornqvist, Robert Valentijn, Frida Lindqvist, Inken Dillmann, Martin Lord, Neanke Bouwman, Jacques Neefjes, Natasja Dolezal, Kees Franken, Stephanie McArdle, Murrium Ahmad, Silvia Johansson, Ferry Ossendorp, Michael Haggman, Wolfgang Lilleby, Gustav Ullenhag, Sam Ladjevardi, Justyna Jarblad, Jan Wouter Drijfhout, Sara Mangsbo
Review
Biochemistry & Molecular Biology
Virginie Stevenin, Jacques Neefjes
Summary: Intracellular bacteria have developed mechanisms to influence host protein post-translational modifications (PTMs) to their advantage. Recent discoveries on host PTMs shed light on the complex host-pathogen interaction. These insights may contribute to the development of new therapeutic approaches.
CELL CHEMICAL BIOLOGY
(2022)