On the path to extinction: Inbreeding and admixture in a declining grey wolf population

Widespread, long-term admixture between grey wolves and domestic dogs across Eurasia and its implications for the conservation status of hybrids

(2018) Małgorzata Pilot et al.   Evolutionary Applications

Ancient European dog genomes reveal continuity since the Early Neolithic

(2017) Laura R. Botigué et al.   Nature Communications

Genomic consequences of intensive inbreeding in an isolated wolf population

(2017) Marty Kardos et al.   Nature Ecology & Evolution

Spatial assessment of wolf-dog hybridization in a single breeding period

(2017) C. Pacheco et al.   Scientific Reports

Wolf population genetics in Europe: a systematic review, meta-analysis and suggestions for conservation and management

(2016) Maris Hindrikson et al.   BIOLOGICAL REVIEWS

Genetic rescue in a severely inbred wolf population

(2016) Mikael Åkesson et al.   MOLECULAR ECOLOGY

Understanding Inbreeding Depression, Purging, and Genetic Rescue

(2016) Philip W. Hedrick et al.   TRENDS IN ECOLOGY & EVOLUTION

Worldwide patterns of genomic variation and admixture in gray wolves

(2015) Zhenxin Fan et al.   GENOME RESEARCH

Toward better understanding of artifacts in variant calling from high-coverage samples

(2014) Heng Li   BIOINFORMATICS

Genetic rescue in Isle Royale wolves: genetic analysis and the collapse of the population

(2014) Philip W. Hedrick et al.   CONSERVATION GENETICS

Strong Artificial Selection in Domestic Mammals Did Not Result in an Increased Recombination Rate

(2014) Violeta Muñoz-Fuentes et al.   MOLECULAR BIOLOGY AND EVOLUTION

Recovery of large carnivores in Europe’s modern human-dominated landscapes

(2014) Guillaume Chapron et al.   SCIENCE

Status and Ecological Effects of the World's Largest Carnivores

(2014) W. J. Ripple et al.   SCIENCE

Genome Sequencing Highlights the Dynamic Early History of Dogs

(2014) Adam H. Freedman et al.   PLoS Genetics

Do social groups prevent Allee effect related extinctions?: The case of wild dogs

(2013) Elena Angulo et al.   Frontiers in Zoology

Identity by Descent: Variation in Meiosis, Across Genomes, and in Populations

(2013) E. A. Thompson   GENETICS

Genome-wide signatures of population bottlenecks and diversifying selection in European wolves

(2013) M Pilot et al.   HEREDITY

The genomics of selection in dogs and the parallel evolution between dogs and humans

(2013) Guo-dong Wang et al.   Nature Communications

PCAdmix: Principal Components-Based Assignment of Ancestry Along Each Chromosome in Individuals with Admixed Ancestry from Two or More Populations

(2012) Abra Brisbin et al.   HUMAN BIOLOGY

Improved whole-chromosome phasing for disease and population genetic studies

(2012) Olivier Delaneau et al.   NATURE METHODS

Fast Computation and Applications of Genome Mappability

(2012) Thomas Derrien et al.   PLoS One

Enhancements to the ADMIXTURE algorithm for individual ancestry estimation

(2011) David H Alexander et al.   BMC BIOINFORMATICS

Quantification of Inbreeding Due to Distant Ancestors and Its Detection Using Dense Single Nucleotide Polymorphism Data

(2011) Matthew C. Keller et al.   GENETICS

A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids

(2011) Bridgett M. vonHoldt et al.   GENOME RESEARCH

Genetic evidence for multiple events of hybridization between wolves and domestic dogs in the Iberian Peninsula

(2011) RAQUEL GODINHO et al.   MOLECULAR ECOLOGY

Signatures of demographic bottlenecks in European wolf populations

(2010) Natalia Sastre et al.   CONSERVATION GENETICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication

(2010) Bridgett M. vonHoldt et al.   NATURE

A Simple Genetic Architecture Underlies Morphological Variation in Dogs

(2010) Adam R. Boyko et al.   PLOS BIOLOGY

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Congenital bone deformities and the inbred wolves (Canis lupus) of Isle Royale

(2009) Jannikke Räikkönen et al.   BIOLOGICAL CONSERVATION

Fast model-based estimation of ancestry in unrelated individuals

(2009) D. H. Alexander et al.   GENOME RESEARCH

The evidence for Allee effects

(2009) Andrew M. Kramer et al.   POPULATION ECOLOGY

Molecular and Evolutionary History of Melanism in North American Gray Wolves

(2009) T. M. Anderson et al.   SCIENCE

Genetic structure of the northwestern Russian wolf populations and gene flow between Russia and Finland

(2008) Jouni Aspi et al.   CONSERVATION GENETICS

Population Structure and Inbreeding From Pedigree Analysis of Purebred Dogs

(2008) F. C. F. Calboli et al.   GENETICS

Captive breeding and the reintroduction of Mexican and red wolves

(2007) P. W. HEDRICK et al.   MOLECULAR ECOLOGY