Genetic mapping of horizontal stripes in Lake Victoria cichlid fishes: benefits and pitfalls of using RAD markers for dense linkage mapping

The Evolutionary Genomics of Cichlid Fishes: Explosive Speciation and Adaptation in the Postgenomic Era

(2014) Frederico Henning et al.   Annual Review of Genomics and Human Genetics

The genomic substrate for adaptive radiation in African cichlid fish

(2014) David Brawand et al.   NATURE

Mapping of pigmentation QTL on an anchored genome assembly of the cichlid fish, Metriaclima zebra

(2013) Claire T O’Quin et al.   BMC GENOMICS

Saturated linkage map construction in Rubus idaeus using genotyping by sequencing and genome-independent imputation

(2013) Judson A Ward et al.   BMC GENOMICS

Genomic architecture of ecologically divergent body shape in a pair of sympatric crater lake cichlid fishes

(2013) Paolo Franchini et al.   MOLECULAR ECOLOGY

Recombination in the threespine stickleback genome-patterns and consequences

(2013) Marius Roesti et al.   MOLECULAR ECOLOGY

Life history trade-offs at a single locus maintain sexually selected genetic variation

(2013) Susan E. Johnston et al.   NATURE

Colour variation in cichlid fish: Developmental mechanisms, selective pressures and evolutionary consequences

(2013) Martine E. Maan et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

Integrating cytogenetics and genomics in comparative evolutionary studies of cichlid fish

(2012) Juliana Mazzuchelli et al.   BMC GENOMICS

EVIDENCE OF ADAPTATION FROM ANCESTRAL VARIATION IN YOUNG POPULATIONS OF BEACH MICE

(2012) Vera S. Domingues et al.   EVOLUTION

A Small Number of Genes Underlie Male Pigmentation Traits in Lake Malawi Cichlid Fishes

(2012) CLAIRE T. O'QUIN et al.   JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION

Origins of Shared Genetic Variation in African Cichlids

(2012) Yong-Hwee E. Loh et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

Unraveling the thread of nature’s tapestry: the genetics of diversity and convergence in animal pigmentation

(2012) Marcus R. Kronforst et al.   Pigment Cell & Melanoma Research

Double Digest RADseq: An Inexpensive Method for De Novo SNP Discovery and Genotyping in Model and Non-Model Species

(2012) Brant K. Peterson et al.   PLoS One

THE QTN PROGRAM AND THE ALLELES THAT MATTER FOR EVOLUTION: ALL THAT'S GOLD DOES NOT GLITTER

(2011) Matthew V. Rockman   EVOLUTION

Genome Evolution and Meiotic Maps by Massively Parallel DNA Sequencing: Spotted Gar, an Outgroup for the Teleost Genome Duplication

(2011) Angel Amores et al.   GENETICS

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

(2011) John W. Davey et al.   NATURE REVIEWS GENETICS

optix Drives the Repeated Convergent Evolution of Butterfly Wing Pattern Mimicry

(2011) R. D. Reed et al.   SCIENCE

Adaptation in the age of ecological genomics: insights from parallelism and convergence

(2011) Kathryn R. Elmer et al.   TRENDS IN ECOLOGY & EVOLUTION

Flapjack--graphical genotype visualization

(2010) I. Milne et al.   BIOINFORMATICS

Genetic basis of differential opsin gene expression in cichlid fishes

(2010) K. L. CARLETON et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

On the origin of species: insights from the ecological genomics of lake whitefish

(2010) L. Bernatchez et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Convergence in pigmentation at multiple levels: mutations, genes and function

(2010) M. Manceau et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

WD40 proteins propel cellular networks

(2010) Christian U. Stirnimann et al.   TRENDS IN BIOCHEMICAL SCIENCES

A golden age for evolutionary genetics? Genomic studies of adaptation in natural populations

(2010) Nicola J. Nadeau et al.   TRENDS IN GENETICS

Computational approaches and software tools for genetic linkage map estimation in plants

(2009) J. Cheema et al.   BRIEFINGS IN BIOINFORMATICS

Segregation distortion and the evolution of sex-determining mechanisms

(2009) M Kozielska et al.   HEREDITY

Pleistocene desiccation in East Africa bottlenecked but did not extirpate the adaptive radiation of Lake Victoria haplochromine cichlid fishes

(2009) K. R. Elmer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

On the Origin and Spread of an Adaptive Allele in Deer Mice

(2009) C. R. Linnen et al.   SCIENCE

Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer

(2009) Y. F. Chan et al.   SCIENCE

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

A Microsatellite-Based Genetic Linkage Map of the Cichlid Fish, Astatotilapia burtoni (Teleostei): A Comparison of Genomic Architectures Among Rapidly Speciating Cichlids

(2008) M. Sanetra et al.   GENETICS

Color change as a potential behavioral strategy

(2008) Wayne J. Korzan et al.   HORMONES AND BEHAVIOR

The Lake Tanganyika cichlid species assemblage: recent advances in molecular phylogenetics

(2008) Stephan Koblmüller et al.   HYDROBIOLOGIA

GGT 2.0: Versatile Software for Visualization and Analysis of Genetic Data

(2008) Ralph van Berloo   JOURNAL OF HEREDITY

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One

A Single Gene Causes Both Male Sterility and Segregation Distortion in Drosophila Hybrids

(2008) N. Phadnis et al.   SCIENCE

Genetics of Sex Determination in Tilapiine Species

(2008) A. Cnaani et al.   Sexual Development