Article
Environmental Sciences
O. Koch, W. A. Mengesha, S. Pironon, T. Pagella, I Ondo, I Rosa, P. Wilkin, J. S. Borrell
Summary: Despite global agricultural growth, food insecurity is increasing in Sub-Saharan Africa. This study explores the potential cultivation range of enset, an underutilized indigenous crop, in southern and eastern Africa using ecological niche modeling. The findings suggest a significant expansion potential for enset cultivation, with integration of crop wild relatives allowing for even greater expansion into dryer and warmer regions. Although climate change may reduce the potential range in the future, there are still suitable areas in Ethiopia, Lake Victoria region, and the Drakensberg Range. By combining bioclimatic assessment with socioeconomic data, priority areas with high population density and food deficits can be identified for enset integration, potentially benefitting millions of people and enhancing climate resilience.
ENVIRONMENTAL RESEARCH LETTERS
(2022)
Article
Agronomy
Fausto Henrique Vieira Araujo, Alexandre Ferreira da Silva, Rodrigo Soares Ramos, Sabrina Rodrigues Ferreira, Jose Barbosa dos Santos, Ricardo Siqueira da Silva, Farzin Shabani
Summary: This study used modeling to predict the suitable areas for Striga asiatica invasion under current and future climate change scenarios. The results showed high suitability areas in South America, Africa, and Europe. There were both agreement and disagreement between different methods in certain regions.
Article
Agronomy
Sheikh Muhammad Masum, Abdul Halim, Mohammad Shamim Hasan Mandal, Md Asaduzzaman, Steve Adkins
Summary: Parthenium weed, a noxious invasive plant species, poses a threat to agriculture and ecosystems in Bangladesh. This study surveyed and modeled the potential distribution of parthenium weed in five districts, revealing high infestation along roadsides, grasslands, and fallow and cropped fields. The findings suggest an increased threat to agro-ecosystems, especially with climate change.
Article
Biodiversity Conservation
Paula Escuer, Joan C. Hinojosa, Carla Minguet-Parramona, Helena Romo, Miguel L. Munguira, Javier Olivares, Vlad Dinca, Gerard Talavera, Roger Vila
Summary: This study clarifies the taxonomic status and conservation status of the Spanish Greenish Black-tip butterfly (Euchloe bazae) using phylogenetic inference and niche modeling. The results indicate that this highly specialized species has a restricted distribution range and may require rapid range shifts for survival. Considering its fragile populations and numerous threats, it is recommended to classify it as "Endangered".
INSECT CONSERVATION AND DIVERSITY
(2022)
Article
Biodiversity Conservation
Yu-Qun Du, Alexander Jueterbock, Muhammad Firdaus, Anicia Q. Hurtado, Delin Duan
Summary: This study investigated the niche differences between two species of Kappaphycus seaweed using ecological niche modeling, ordination, and hypervolume approaches. The results showed significant niche differences in both geographical and environmental space between the two species. The models predicted that rising sea surface temperature will lead to different range shifts for the two species, with one species suffering contraction while the other species expanding its distribution. This study enhances our understanding of Kappaphycus aquaculture and highlights the importance of conservation and investigation under climate change.
ECOLOGICAL INDICATORS
(2023)
Article
Biochemistry & Molecular Biology
Rhett M. Rautsaw, Tristan D. Schramer, Rachel Acuna, Lindsay N. Arick, Mark DiMeo, Kathryn P. Mercier, Michael Schrum, Andrew J. Mason, Mark J. Margres, Jason L. Strickland, Christopher L. Parkinson
Summary: The study reveals high intraspecific gene flow within the Nerodia fasciata-clarkii complex in Florida, but reduced gene flow is observed between inland and coastal lineages. The results demonstrate that ecological differences, particularly those caused by salinity, lead to divergent selection and promote species divergence despite significant gene flow.
MOLECULAR BIOLOGY AND EVOLUTION
(2021)
Article
Multidisciplinary Sciences
Emily M. Koot, Mary Morgan-Richards, Steven A. Trewick
Summary: Mountains serve as sensitive indicators of climate change, and their environmental gradients have a significant impact on biodiversity. This study used statistical models to predict potential habitat changes for 12 flightless grasshopper species in New Zealand's alpine regions. The results indicate that due to habitat loss, the range of these species will significantly decrease, and some may even face extinction.
ROYAL SOCIETY OPEN SCIENCE
(2022)
Article
Biodiversity Conservation
Kristen Ruegg, Eric C. Anderson, Marius Somveille, Rachael A. Bay, Mary Whitfield, Eben H. Paxton, Thomas B. Smith
Summary: Global loss of biodiversity has increased the urgency of understanding species responses to rapid environmental change, with specialized species facing challenges; using a genome-wide genetic approach, migratory routes of different populations of the willow flycatcher have been successfully mapped, further quantifying the differences in climate tolerances within populations.
GLOBAL CHANGE BIOLOGY
(2021)
Article
Zoology
Fangyuan Yu, Yiwen Sun, Tiejun Wang, Andrew K. Skidmore, Changqing Ding, Xinping Ye
Summary: The study integrated ecological niche dynamics into the species distribution modeling of the Asian crested ibis in East Asia. The research found that the crested ibis retained similar ecological niches over time.
The current suitable habitat for crested ibis has decreased by 39.6% compared to historical range, with human activity having a greater impact than climate change on their distribution. Future potentially suitable habitat may shift northeastward and northwestward, possibly expanding by 18.7% compared to historical range.
INTEGRATIVE ZOOLOGY
(2022)
Article
Parasitology
Raquel Gardini Sanches Palasio, Thiago Salomao de Azevedo, Roseli Tuan, Francisco Chiaravalloti-Neto
Summary: This study evaluated the distribution of Biomphalaria species habitats in the Middle Paranapanema region of Sao Paulo, Brazil, and predicted future changes, focusing on the maintenance of habitats, expansion of scattered spots, and the spread of species to new areas.
Article
Biodiversity Conservation
Severin Biaou, Gerard Nounagnon Gouwakinnou, Florent Noulekoun, Kolawole Valere Salako, Jesugnon Marie Reine Houndjo Kpoviwanou, Thierry Dehouegnon Houehanou, Honore Samadori Sorotori Biaou
Summary: Climate change is expected to have an impact on species distribution globally. The current evaluation methods assume that species respond uniformly to environmental changes along their distribution range, but populations occupying different niches may respond differently due to local adaptation. Therefore, incorporating intraspecific variation into species distribution models can result in more reliable predictions.
GLOBAL ECOLOGY AND CONSERVATION
(2023)
Article
Environmental Sciences
Serkan Gul, Yusuf Kumlutas, Cetin Ilgaz, Kamil Candan
Summary: This study created present and future potential distribution maps for six species of Lacerta in Turkey based on occurrence data and climatic variables. The study used two scenarios (shared socioeconomic pathways, SSPs: 245 and 585) and two timeframes (2041-2060 and 2081-2100) for future projections. The comparison of present and future potential distributions showed that the distribution ranges of these species will expand and reveal new environments in the future.
ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH
(2023)
Article
Multidisciplinary Sciences
Gwen S. Antell, Isabel S. Fenton, Paul J. Valdes, Erin E. Saupe
Summary: Research compared species with static niches and those with more flexible niches in terms of adapting to climate change, finding that species' temperature preferences did not adjust with global temperature changes. Intraspecific niches remained relatively stable both in the short term (8 ka) and across glacial and interglacial extremes. Evolutionary trait models supported widespread niche stasis within species.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
(2021)
Article
Parasitology
Madeleine Noll, Richard Wall, Benjamin L. Makepeace, Hannah Newbury, Lukasz Adaszek, Rene Bodker, Agustin Estrada-Pena, Jacques Guillot, Isabel Pereira da Fonseca, Julia Probst, Paul Overgaauw, Christina Strube, Fathiah Zakham, Stefania Zanet, Hannah Rose Vineer
Summary: This study assessed the ability of different climate niche modelling approaches to explain the known distribution of I. ricinus and D. reticulatus in Europe. The results showed that no single model was able to fully capture the distribution of these tick species.
PARASITES & VECTORS
(2023)
Article
Plant Sciences
Daniele Buono, Gulzar Khan, Klaus Bernhard von Hagen, Petr A. Kosachev, Eike Mayland-Quellhorst, Sergei L. Mosyakin, Dirk C. Albach
Summary: The study investigated the phylogeographic structure of two closely related Veronica species across Europe and found evidence of hybridization and polyploidization between them. Genetic data and crossing experiments suggested directional introgression from V. spicata to V. longifolia, while the maintenance of species-level separation was attributed to adaptation to different habitats and spatial isolation rather than reproductive isolation.
FRONTIERS IN PLANT SCIENCE
(2021)
Article
Plant Sciences
Luwei Wang, Junyi Ding, James S. Borrell, Martin Cheek, Hugh A. McAllister, Feifei Wang, Lu Liu, Huayu Zhang, Qiufeng Zhang, Yiming Wang, Nian Wang
Summary: This study revised the taxonomy of section Costatae based on integrated evidence from morphology, genetics, ploidy, and geography. Six taxa were identified within this section. The use of morphological, geographical, genetic, and ploidy-level data for species delineation proved to be valuable.
Article
Biochemistry & Molecular Biology
Yasmin Lau, Henry Patrick Oamen, Marcel Grogg, Iuliia Parfenova, Juha Saarikangas, Robin Hannay, Richard Alan Nichols, Donald Hilvert, Yves Barral, Fabrice Caudron
Summary: This study found that Whi3(mnem) is closely associated with endoplasmic reticulum (ER) membranes and is retained in the mother cell by the lateral diffusion barriers at the bud neck. When there were defects in the barriers, Whi3(mnem) propagated in a prion-like manner. The amyloid-forming domain of Whi3 was crucial for both memory and prion-like behaviors. The results suggest that confined self-templating super-assembly is a powerful mechanism for encoding information in a spatially defined manner.
Article
Biochemistry & Molecular Biology
Matt Huff, Josiah Seaman, Wu Di, Tetyana Zhebentyayeva, Laura J. Kelly, Nurul Faridi, Charles D. Nelson, Endymion Cooper, Teodora Best, Kim Steiner, Jennifer Koch, Jeanne Romero Severson, John E. Carlson, Richard Buggs, Margaret Staton
Summary: Green ash, the most widely distributed ash tree in North America, has been threatened by the non-native invasive emerald ash borer. Some native green ash trees display partial resistance to the insect, indicating potential for breeding more resistant populations. The chromosome-level assembly and genetic variation studies provide valuable resources for research on ash breeding, ecology, and evolution.
MOLECULAR ECOLOGY RESOURCES
(2022)
Meeting Abstract
Biochemistry & Molecular Biology
Melissa Taylor, Richard A. Nichols, Michael Herr, Danielle Loder
Editorial Material
Biochemistry & Molecular Biology
Richard J. A. Buggs
Article
Biochemistry & Molecular Biology
Gabriele Nocchi, Jing Wang, Long Yang, Junyi Ding, Ying Gao, Richard J. A. Buggs, Nian Wang
Summary: This study investigates the population genomic structure of the Asian white birch in China and identifies the factors influencing genomic diversity, such as hybridization, demography, and adaptation. The results show clear distinctions between different species and genetic clusters within B. platyphylla. The study also provides insights into the potential role of natural selection in shaping genetic diversity and identifies environmentally associated SNPs that may indicate future threats from climate change.
Article
Biochemistry & Molecular Biology
Hannes Becher, Richard A. Nichols
Summary: This article introduces two statistical methods to estimate the abundance of nuclear inserts even without a nuclear genome assembly. The first method only requires low-coverage sequencing data commonly generated for population studies. The second method additionally requires individuals carrying extranuclear DNA with diverged genotypes. The study demonstrates the utility of low-coverage high-throughput sequencing data for quantifying nuclear vagrant DNAs.
MOLECULAR ECOLOGY RESOURCES
(2023)
Article
Virology
Charlotte E. Ford, Lola M. Brookes, Emily Skelly, Chris Sergeant, Tresai Jordine, Francois Balloux, Richard A. Nichols, Trenton W. J. Garner
Summary: Ranaviruses have caused mass mortality events in amphibians worldwide. Non-lethal screening using buccal swabbing has been found to be an effective method for detecting the virus and could replace lethal sampling for ranavirus surveillance.
Article
Biochemistry & Molecular Biology
Oliver W. White, Manosh Kumar Biswas, Wendawek M. Abebe, Yann Dussert, Firew Kebede, Richard A. Nichols, Richard J. A. Buggs, Sebsebe Demissew, Feleke Woldeyes, Alexander S. T. Papadopulos, Trude Schwarzacher, Pat J. S. Heslop-Harrison, Paul Wilkin, James S. Borrell
Summary: Clonal propagation allows for rapid selection and multiplication of favorable crop genotypes, but it can lead to low genetic diversity and accumulation of deleterious mutations, making crops less resilient to pathogens or environmental change.
Article
Biodiversity Conservation
Rachel R. Chase, Lucie Buchi, Jonne Rodenburg, Nicolas Roux, Abebe Wendawek, James S. Borrell
Summary: Climate resilient crops, such as enset in Ethiopia, play an increasingly important role in ensuring food security for smallholder farmers in regions prone to climate extremes. This study shows that frequent severe drought events have led to an increase in enset production area, highlighting the adaptive capacity of indigenous agrisystems. The findings suggest that promoting the cultivation of perennial and storable crops can contribute to improving food security and resilience in the face of climate variability.
PLANTS PEOPLE PLANET
(2023)
Meeting Abstract
Biochemistry & Molecular Biology
Richard A. Nichols, Valerie D. O'Loughlin
Article
Biodiversity Conservation
Carly Cowell, Alan Paton, James S. Borrell, China Williams, Paul Wilkin, Alexandre Antonelli, William J. Baker, Richard Buggs, Michael F. Fay, Roberta Gargiulo, Olwen M. Grace, Benedikt G. Kuhnhauser, Yannick Woudstra, Paul J. Kersey
Summary: Digitized molecular data, referred to as Digital Sequence Information (DSI), are crucial for scientific research and genetic resource utilization, but access and benefit-sharing concerns remain unresolved due to lack of clear definitions and governance.
PLANTS PEOPLE PLANET
(2022)
Article
Biodiversity Conservation
Gabriele Nocchi, Nathan Brown, Tim L. R. Coker, William J. Plumb, Jonathan J. Stocks, Sandra Denman, Richard J. A. Buggs
Summary: The research reveals that oak populations in British parklands have considerable diversity, mainly from local seed sources, with evidence of natural regeneration and hybridization between species. Past gene flow, differentiation within genomes, and similarities to ancient woodlands suggest a complex genetic history.
PLANTS PEOPLE PLANET
(2022)