Carving out turf in a biodiversity hotspot: multiple, previously unrecognized shrew species co-occur on Java Island, Indonesia

Archboldomys(Muridae: Murinae) Reconsidered: A New Genus and Three New Species of Shrew Mice from Luzon Island, Philippines

(2012) Danilo S. Balete et al.   AMERICAN MUSEUM NOVITATES

Evolutionary novelty in a rat with no molars

(2012) J. A. Esselstyn et al.   Biology Letters

Mentawai’s endemic, relictual fauna: is it evidence for Pleistocene extinctions on Sumatra?

(2012) Andreas Wilting et al.   JOURNAL OF BIOGEOGRAPHY

Large-scale species delimitation method for hyperdiverse groups

(2012) N. PUILLANDRE et al.   MOLECULAR ECOLOGY

Single-locus species delimitation: a test of the mixed Yule-coalescent model, with an empirical application to Philippine round-leaf bats

(2012) J. A. Esselstyn et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Coalescent-based species delimitation in an integrative taxonomy

(2012) Matthew K. Fujita et al.   TRENDS IN ECOLOGY & EVOLUTION

Biogeography of the Indo-Australian Archipelago

(2011) David J. Lohman et al.   Annual Review of Ecology Evolution and Systematics

Species Interactions during Diversification and Community Assembly in an Island Radiation of Shrews

(2011) Jacob A. Esselstyn et al.   PLoS One

Recent and Rapid Speciation with Limited Morphological Disparity in the Genus Rattus

(2011) Kevin C. Rowe et al.   SYSTEMATIC BIOLOGY

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Adaptive Radiation, Ecological Opportunity, and Evolutionary Determinism

(2010) Jonathan B. Losos   AMERICAN NATURALIST

DendroPy: a Python library for phylogenetic computing

(2010) J. Sukumaran et al.   BIOINFORMATICS

Integrating phylogenetic and taxonomic evidence illuminates complex biogeographic patterns along Huxley’s modification of Wallace’s Line

(2010) Jacob A. Esselstyn et al.   JOURNAL OF BIOGEOGRAPHY

Changes in monsoon and ocean circulation and the vegetation cover of southwest Sumatra through the last 83,000years: The record from marine core BAR94-42

(2010) Sander van der Kaars et al.   PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY

An Ancient Origin for the Enigmatic Flat-Headed Frogs (Bombinatoridae: Barbourula) from the Islands of Southeast Asia

(2010) David C. Blackburn et al.   PLoS One

Forest contraction in north equatorial Southeast Asia during the Last Glacial Period

(2010) C. M. Wurster et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bayesian species delimitation using multilocus sequence data

(2010) Z. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Mitochondrial whims: metabolic rate, longevity and the rate of molecular evolution

(2009) N. Galtier et al.   Biology Letters

Chapter 7. A New Genus and Species of Small ‘Tree-Mouse’ (Rodentia, Muridae) Related to the Philippine Giant Cloud Rats

(2009) Lawrence R Heaney et al.   BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY

DO GEOLOGICAL OR CLIMATIC PROCESSES DRIVE SPECIATION IN DYNAMIC ARCHIPELAGOS? THE TEMPO AND MODE OF DIVERSIFICATION IN SOUTHEAST ASIAN SHREWS

(2009) Jacob A. Esselstyn et al.   EVOLUTION

How Robust Are "Isolation with Migration" Analyses to Violations of the IM Model? A Simulation Study

(2009) J. L. Strasburg et al.   MOLECULAR BIOLOGY AND EVOLUTION

Origin and diversification of Philippine bulbuls

(2009) Carl H. Oliveros et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Niches, body sizes, and the disassembly of mammal communities on the Sunda Shelf islands

(2009) J. G. Okie et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Adaptive radiation, nonadaptive radiation, ecological speciation and nonecological speciation

(2009) Rebecca J. Rundell et al.   TRENDS IN ECOLOGY & EVOLUTION

The Ecological Dynamics of Clade Diversification and Community Assembly

(2008) Mark A. McPeek   AMERICAN NATURALIST

Evidence for multiple species of Sunda colugo

(2008) Jan E. Janečka et al.   CURRENT BIOLOGY

A New Species ofDesmalopex(Pteropodidae) from the Philippines, with a Phylogenetic Analysis of the Pteropodini

(2008) Jacob A. Esselstyn et al.   JOURNAL OF MAMMALOGY

Description of a new species of Crocidura (Soricomorpha: Soricidae) from the island of Phu Quoc, Vietnam

(2008) Alexei V. Abramov et al.   MAMMALIA

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

Biogeographic origin and radiation of the Old World crocidurine shrews (Mammalia: Soricidae) inferred from mitochondrial and nuclear genes

(2008) Sylvain Dubey et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Density-Dependent Cladogenesis in Birds

(2008) Albert B Phillimore et al.   PLOS BIOLOGY