Species delimitation in fungal endophyte diversity studies and its implications in ecological and biogeographic inferences

Trichoderma amazonicum, a new endophytic species on Hevea brasiliensis and H. guianensis from the Amazon basin

(2011) Priscila Chaverri et al.   MYCOLOGIA

The Trichoderma harzianum demon: complex speciation history resulting in coexistence of hypothetical biological species, recent agamospecies and numerous relict lineages

(2010) Irina S Druzhinina et al.   BMC EVOLUTIONARY BIOLOGY

Variabilidade genética na região its do rDNA de isolados de trichoderma spp. (Biocontrolador) e Fusarium oxysporum f. sp. Chrysanthemi

(2010) Josiane Pacheco Menezes et al.   CIENCIA E AGROTECNOLOGIA

Diversity of fungal endophytes in leaves and stems of wild rubber trees (Hevea brasiliensis) in Peru

(2010) Romina Gazis et al.   Fungal Ecology

Colletotrichum gloeosporioides s.l. associated with Theobroma cacao and other plants in Panamá: multilocus phylogenies distinguish host-associated pathogens from asymptomatic endophytes

(2010) Enith I. Rojas et al.   MYCOLOGIA

Ecological Genetic Divergence of the Fungal Pathogen Didymella rabiei on Sympatric Wild and Domesticated Cicer spp. (Chickpea)

(2009) O. Frenkel et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Using Data-Display Networks for Exploratory Data Analysis in Phylogenetic Studies

(2009) D. A. Morrison   MOLECULAR BIOLOGY AND EVOLUTION

Rapid radiation, ancient incomplete lineage sorting and ancient hybridization in the endemic Lake Tanganyika cichlid tribe Tropheini

(2009) Stephan Koblmüller et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Pleospora species with Stemphylium anamorphs: a four locus phylogeny resolves new lineages yet does not distinguish among species in the Pleospora herbarum clade

(2009) Patrik Inderbitzin et al.   MYCOLOGIA

New Heuristic Methods for Joint Species Delimitation and Species Tree Inference

(2009) Brian C. O'Meara   SYSTEMATIC BIOLOGY

Biogeographic and phylogenetic patterns in diversity of liverwort-associated endophytes

(2008) E. C. Davis et al.   AMERICAN JOURNAL OF BOTANY

Hierarchical comparative analysis of genetic and genitalic geographical structure: testing patterns of male and female genital evolution in the scarab beetle Phyllophaga hirticula (Coleoptera: Scarabaeidae)

(2008) MAXI POLIHRONAKIS   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Divergent adaptation promotes reproductive isolation among experimental populations of the filamentous fungus Neurospora

(2008) Jeremy R Dettman et al.   BMC EVOLUTIONARY BIOLOGY

A GENEALOGICAL APPROACH TO QUANTIFYING LINEAGE DIVERGENCE

(2008) Michael P. Cummings et al.   EVOLUTION

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

Multiple gene genealogies and phenotypic data reveal cryptic species of the Botryosphaeriaceae: A case study on the Neofusicoccum parvum/N. ribis complex

(2008) Draginja Pavlic et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY

An Integrative Method for Delimiting Cohesion Species: Finding the Population-Species Interface in a Group of Californian Trapdoor Spiders with Extreme Genetic Divergence and Geographic Structuring

(2008) Jason E. Bond et al.   SYSTEMATIC BIOLOGY

Molecular characterisation of fungal endophytic morphospecies associated with the indigenous forest tree, Theobroma gileri, in Ecuador

(2008) Sarah E. Thomas et al.  

Diversity and evolutionary origins of fungi associated with seeds of a neotropical pioneer tree: a case study for analysing fungal environmental samples

(2008) Jana M. U'Ren et al.  

Geographic locality and host identity shape fungal endophyte communities in cupressaceous trees

(2007) Michele T. Hoffman et al.