Evolutionary and Population Genomics of the Cavity Causing Bacteria Streptococcus mutans

Transcriptional Organization and Physiological Contributions of the relQ Operon of Streptococcus mutans

(2012) J. N. Kim et al.   JOURNAL OF BACTERIOLOGY

SnIPRE: Selection Inference Using a Poisson Random Effects Model

(2012) Kirsten E. Eilertson et al.   PLoS Computational Biology

Comparative Genomic Analysis of the Streptococcus dysgalactiae Species Group: Gene Content, Molecular Adaptation, and Promoter Evolution

(2011) Haruo Suzuki et al.   Genome Biology and Evolution

Population genetics and evolution of the pan-genome of Streptococcus pneumoniae

(2011) Alessandro Muzzi et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Genetic Diversity of Plaque Mutans Streptococci with rep-PCR

(2011) K. Cheon et al.   JOURNAL OF DENTAL RESEARCH

Streptococcus mutans strains recovered from caries-active or caries-free individuals differ in sensitivity to host antimicrobial peptides

(2011) E. Phattarataratip et al.   Molecular Oral Microbiology

Rapid Pneumococcal Evolution in Response to Clinical Interventions

(2011) N. J. Croucher et al.   SCIENCE

Evolutionary Dynamics of Complete Campylobacter Pan-Genomes and the Bacterial Species Concept

(2010) Tristan Lefébure et al.   Genome Biology and Evolution

A Transcriptional Regulator and ABC Transporters Link Stress Tolerance, (p)ppGpp, and Genetic Competence in Streptococcus mutans

(2010) K. Seaton et al.   JOURNAL OF BACTERIOLOGY

The hdrRM Operon of Streptococcus mutans Encodes a Novel Regulatory System for Coordinated Competence Development and Bacteriocin Production

(2010) T. Okinaga et al.   JOURNAL OF BACTERIOLOGY

Generation of Diversity in Streptococcus mutans Genes Demonstrated by MLST

(2010) Thuy Do et al.   PLoS One

Deep resequencing reveals excess rare recent variants consistent with explosive population growth

(2010) Alex Coventry et al.   Nature Communications

Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species

(2010) Claudio Donati et al.   GENOME BIOLOGY

Changes in Biochemical and Phenotypic Properties of Streptococcus mutans during Growth with Aeration

(2009) S.-J. Ahn et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparative genomic analyses of Streptococcus mutans provide insights into chromosomal shuffling and species-specific content

(2009) Fumito Maruyama et al.   BMC GENOMICS

The Power of the Methods for Detecting Interlocus Gene Conversion

(2009) S. P. Mansai et al.   GENETICS

Global transcriptional analysis of acid-inducible genes in Streptococcus mutans: multiple two-component systems involved in acid adaptation

(2009) Y. Gong et al.   MICROBIOLOGY-SGM

A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis

(2009) S. R. Leopold et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Estimating the size of the bacterial pan-genome

(2009) Pascal Lapierre et al.   TRENDS IN GENETICS

Comparative whole-genome analysis ofStreptococcus mutansisolates within and among individuals of different caries status

(2009) L. Zhang et al.   Oral microbiology and immunology

Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data

(2009) Ryan N. Gutenkunst et al.   PLoS Genetics

Comparative genomics: the bacterial pan-genome

(2008) Hervé Tettelin et al.   CURRENT OPINION IN MICROBIOLOGY

Mapping short DNA sequencing reads and calling variants using mapping quality scores

(2008) H. Li et al.   GENOME RESEARCH

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Streptococcal Antagonism in Oral Biofilms: Streptococcus sanguinis and Streptococcus gordonii Interference with Streptococcus mutans

(2008) J. Kreth et al.   JOURNAL OF BACTERIOLOGY

Phage-Associated Mutator Phenotype in Group A Streptococcus

(2008) J. Scott et al.   JOURNAL OF BACTERIOLOGY

The cia operon of Streptococcus mutans encodes a unique component required for calcium-mediated autoregulation

(2008) Xuesong He et al.   MOLECULAR MICROBIOLOGY

Interpreting principal component analyses of spatial population genetic variation

(2008) John Novembre et al.   NATURE GENETICS

Role of selection in the emergence of lineages and the evolution of virulence in Neisseria meningitidis

(2008) C. O. Buckee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Assessing the Evolutionary Impact of Amino Acid Mutations in the Human Genome

(2008) Adam R. Boyko et al.   PLoS Genetics