Estimating Divergence Dates and Substitution Rates in the Drosophila Phylogeny

PHYLOGENETIC CONSTRAINTS IN KEY FUNCTIONAL TRAITS BEHIND SPECIES’ CLIMATE NICHES: PATTERNS OF DESICCATION AND COLD RESISTANCE ACROSS 95DROSOPHILASPECIES

(2012) Vanessa Kellermann et al.   EVOLUTION

Genomic Variation in Natural Populations of Drosophila melanogaster

(2012) C. H. Langley et al.   GENETICS

Monophyly, divergence times, and evolution of host plant use inferred from a revised phylogeny of the Drosophila repleta species group

(2012) Deodoro C.S.G. Oliveira et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Origin and Evolution of the Unique Hepatitis C Virus Circulating Recombinant Form 2k/1b

(2011) J. Raghwani et al.   JOURNAL OF VIROLOGY

Time-dependent rates of molecular evolution

(2011) SIMON Y. W. HO et al.   MOLECULAR ECOLOGY

Phylogenetic relationships between Sophophora and Lordiphosa, with proposition of a hypothesis on the vicariant divergences of tropical lineages between the Old and New Worlds in the family Drosophilidae

(2011) Jian-jun Gao et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogeny of the African and Asian Phortica (Drosophilidae) deduced from nuclear and mitochondrial DNA sequences

(2011) Huiluo Cao et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Increasing the data size to accurately reconstruct the phylogenetic relationships between nine subgroups of the Drosophila melanogaster species group (Drosophilidae, Diptera)

(2011) Yong Yang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Episodic radiations in the fly tree of life

(2011) B. M. Wiegmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A supermatrix-based molecular phylogeny of the family Drosophilidae

(2010) KIM VAN DER LINDE et al.   Genetics Research

Don't forget the ancestral polymorphisms

(2010) D Charlesworth   HEREDITY

Radiation of the ,,Drosophila“ subgenus (Drosophilidae, Diptera) in the Neotropics

(2010) Lizandra J. Robe et al.   JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH

A Generation Time Effect on the Rate of Molecular Evolution in Invertebrates

(2010) Jessica A. Thomas et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogenetic and ecological relationships of the Hawaiian Drosophila inferred by mitochondrial DNA analysis

(2010) Patrick M. O’Grady et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Old Taxa on Young Islands: A Critique of the Use of Island Age to Date Island-Endemic Clades and Calibrate Phylogenies

(2010) Michael Heads   SYSTEMATIC BIOLOGY

Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines

(2009) P. D. Keightley et al.   GENOME RESEARCH

Quantitative Prediction of Molecular Clock and Ka/Ks at Short Timescales

(2009) G. I. Peterson et al.   MOLECULAR BIOLOGY AND EVOLUTION

Bayesian Inference of Species Trees from Multilocus Data

(2009) J. Heled et al.   MOLECULAR BIOLOGY AND EVOLUTION

Accounting for Calibration Uncertainty in Phylogenetic Estimation of Evolutionary Divergence Times

(2009) Simon Y. W. Ho et al.   SYSTEMATIC BIOLOGY

Out of Hawaii: the origin and biogeography of the genus Scaptomyza (Diptera: Drosophilidae)

(2008) P. O'Grady et al.   Biology Letters

Divergence Times in Caenorhabditis and Drosophila Inferred from Direct Estimates of the Neutral Mutation Rate

(2008) A. D. Cutter   MOLECULAR BIOLOGY AND EVOLUTION