Article
Oncology
Jeffrey R. White, Dakota T. Thompson, Kelsey E. Koch, Boris S. Kiriazov, Anna C. Beck, Dana M. van der Heide, Benjamin G. Grimm, Mikhail V. Kulak, Ronald J. Weigel
Summary: In melanoma metastasis, the role of the transcription factor AP-2 alpha is controversial, with some studies suggesting tumor suppressor activity while others show it facilitates metastasis by upregulating E2F pathway genes including EZH2. AP-2 alpha interacts with the NuRD complex, and its loss results in removal of activating chromatin marks and promotion of metastasis. These findings suggest AP-2 alpha can serve as a biomarker for predicting response to EZH2 inhibitors in treating advanced melanomas.
Article
Cell Biology
Han Yan, Qi Li, Mengying Li, Xiuqun Zou, Ningning Bai, Zichao Yu, Jie Zhang, Dan Zhang, Qun Zhang, Jiamin Wang, Hao Jia, Yingjie Wu, Zhaoyuan Hou
Summary: The study shows that depletion of Ajuba in 3T3-L1 cells reduces the expression of PPARγ and C/EBPα, impairing adipocyte differentiation, while overexpression increases their expression and promotes differentiation. Restoring C/EBPα or PPARγ expression in Ajuba-deficient cells improves impaired lipid accumulation. Ajuba interacts with C/EBPβ and recruits CBP to enhance binding to the promoter regions of PPARγ and C/EBPα, leading to increased gene expression.
MOLECULAR AND CELLULAR ENDOCRINOLOGY
(2022)
Article
Biochemistry & Molecular Biology
Weimin Lin, Lei Chen, Wenjing Meng, Kai Yang, Shengjuan Wei, Wei Wei, Jie Chen, Lifan Zhang
Summary: This study used RNA sequencing to investigate the role of C/EBP alpha in regulating proliferation and differentiation of porcine pre-adipocytes. The study identified key non-coding RNAs and their correlated mRNAs, providing novel insights into the molecular mechanism of adipogenesis.
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS
(2022)
Article
Oncology
Ana P. Kutschat, Feda H. Hamdan, Xin Wang, Alexander Q. Wixom, Zeynab Najafova, Christine S. Gibhardt, Waltraut Kopp, Jochen Gaedcke, Philipp Strobel, Volker Ellenrieder, Ivan Bogeski, Elisabeth Hessmann, Steven A. Johnsen
Summary: Gemcitabine-resistant PDAC tumors show coamplification of RRM1 and STIM1, where RRM1 is required for resistance while high STIM1 levels lead to increased cytosolic calcium levels. This calcium influx impairs ER stress response and activates NFAT signaling, revealing a potential target for therapy in PDAC.
Article
Cell Biology
Zhong-xin Jiang, Yi-ning Wang, Zi-yuan Li, Zhi-hui Dai, Yi He, Kun Chu, Jia-yi Gu, Yi-Xuan Ji, Ning-xia Sun, Fu Yang, Wen Li
Summary: The study demonstrates that m6A adenine regulates the function of GCs in female ovarian aging by modulating FTO demethylase, which in turn affects ovarian aging. FTO retards ovarian cell aging by regulating FOS expression.
CELL DEATH & DISEASE
(2021)
Article
Biochemistry & Molecular Biology
Sun Young Lee, Ka Hyon Park, Gyuseok Lee, Su-Jin Kim, Won-Hyun Song, Seung-Hee Kwon, Jeong-Tae Koh, Yun Hyun Huh, Je-Hwang Ryu
Summary: Aging is associated with bone fragility due to cellular senescence and bone loss. The expression of HIF-2 alpha, a regulator of bone remodeling, is upregulated in aged bones, and its depletion reverses age-induced bone loss in male mice. HIF-2 alpha may act as an intrinsic factor in senescence-related dysfunction of bone homeostasis.
EXPERIMENTAL AND MOLECULAR MEDICINE
(2021)
Article
Medicine, Research & Experimental
Dongyin Guan, Hosung Bae, Dishu Zhou, Ying Chen, Chunjie Jiang, Cam Mong La, Yang Xiao, Kun Zhu, Wenxiang Hu, Trang Minh Trinh, Panpan Liu, Ying Xiong, Bishuang Cai, Cholsoon Jang, Mitchell A. Lazar
Summary: Hepatocyte-specific deletion of Rev-erb alpha and -beta affects cholesterol and lipid metabolism, as well as rhythmic gene expression in liver nonparenchymal cells. In diet-induced obesity-induced fatty liver, SCAP in hepatocytes is required for diurnal remodeling and epigenomic reprogramming in liver macrophages. Loss of REV-ERB alpha and beta attenuates the rhythmicity of liver macrophages and alters polypeptide secretion.
JOURNAL OF CLINICAL INVESTIGATION
(2023)
Article
Entomology
Jia Liu, Zheming Liu, Haihao Ma, Yaying Yu, Chengjia Zhang, Wei Zheng, Yilong Man, Hang Zhu, Yong Zhou, Xi Chen, Xiaomao Zhou, Aiping Zeng
Summary: The study found that trehalase in Plutella xylostella demonstrates significant expression activity in Bt-resistant and field populations, potentially regulated by C/EBP alpha. This discovery reveals the potential role and mechanism of trehalase in the development of pest resistance.
Article
Biochemistry & Molecular Biology
Keisuke Omori, Shohei Otani, Yuki Date, Tomoya Ueno, Tomoko Ito, Masahiro Umeda, Kosei Ito
Summary: Osteosarcoma is a disease in humans characterized by TP53 mutations. In mice, loss of p53 triggers OS development, and osteoprogenitor-specific p53-deleted mice are widely used to study the process of osteosarcomagenesis. However, the molecular mechanisms underlying the initiation or progression of OS following or parallel to p53 inactivation remain largely unknown. This study reveals a novel tumor suppressive mechanism mediated by C/ebp alpha in p53-deficient osteosarcomagenesis, highlighting the importance of the Runx-Myc oncogenic axis as a therapeutic target for OS.
Article
Rheumatology
Tadashi Hosoya, Tetsuya Saito, Hiroyuki Baba, Nao Tanaka, Seiji Noda, Youji Komiya, Yasuhiro Tagawa, Akio Yamamoto, Fumitaka Mizoguchi, Kimito Kawahata, Nobuyuki Miyasaka, Hitoshi Kohsaka, Shinsuke Yasuda
Summary: This study reveals that inhibiting CDK4/6 activity can attenuate cartilage destruction and MMP-3 production, providing chondroprotective effects. These effects were achieved by impairing AP-1 transcriptional activity and destabilizing JUN.
Article
Plant Sciences
Flora M. Hetherington, Medhavi Kakkar, Jennifer F. Topping, Keith Lindsey
Summary: The study reveals that the change in plant root architecture is regulated by potassium ion (K+) deprivation through a reduction in cell division rate in lateral root meristems, primarily mediated by gibberellic acid (GA) signaling. Transcriptomic analysis showed that transcription factors JUB1 and CBF1, as well as the CBF1 target gene SFR6, play crucial roles in the response to K+ deprivation in lateral root growth.
Article
Biology
Stefanie Dichtl, David E. Sanin, Carolin K. Koss, Sebastian Willenborg, Andreas Petzold, Maria C. Tanzer, Andreas Dahl, Agnieszka M. Kabat, Laura Lindenthal, Leonie Zeitler, Sabrina Satzinger, Alexander Strasser, Matthias Mann, Axel Roers, Sabine A. Eming, Karim C. El Kasmi, Edward J. Pearce, Peter J. Murray
Summary: Anti-TNF therapies can protect against chronic diseases by modulating the balance of macrophage activity, specifically regulating components of tissue and reparative M2 macrophages.
LIFE SCIENCE ALLIANCE
(2022)
Article
Neurosciences
Munir Gunes Kutlu, Jennifer E. Zachry, Patrick R. Melugin, Jennifer Tat, Stephanie Cajigas, Atagun U. Isiktas, Dev D. Patel, Cody A. Siciliano, Geoffrey Schoenbaum, Melissa J. Sharpe, Erin S. Calipari
Summary: Research shows that dopamine in the nucleus accumbens core is activated by novel, neutral stimuli and tracks the familiarity of these stimuli, influencing the speed of future learning. Associative learning frameworks do not always account for the effects of novelty on behavior and associative learning.
NATURE NEUROSCIENCE
(2022)
Article
Multidisciplinary Sciences
Xiling Li, Chun Chien, Yifu Han, Zihan Sun, Xun Chen, Dion Dickman
Summary: The study revealed that the Glutamate-gated chloride channel (GluCl alpha) in Drosophila neurons plays a critical role in presynaptic homeostatic depression (PHD), driving the process through an activity-dependent anionic conductance.
Article
Cell Biology
Yuxiong Lu, Qing Yang, Yubin Su, Yin Ji, Guobang Li, Xianzhi Yang, Liyan Xu, Zhaoliang Lu, Jiajun Dong, Yi Wu, Jin-Xin Bei, Chaoyun Pan, Xiaoqiong Gu, Bo Li
Summary: MYCN amplification in pediatric neuroblastoma cells increases sensitivity to GPX4-targeting ferroptosis inducers by upregulating TFRC expression, leading to enhanced iron metabolism and lipid peroxidation, suggesting potential therapeutic strategies for treating MYCN-amplified NB.
CELL DEATH & DISEASE
(2021)
Article
Biochemistry & Molecular Biology
Xiangru Huo, Luzhang Ji, Yuwen Zhang, Pin Lv, Xuan Cao, Qianfeng Wang, Zixiang Yan, Shuangshuang Dong, Duo Du, Feng Zhang, Gang Wei, Yun Liu, Bo Wen
Article
Biochemistry & Molecular Biology
Luzhang Ji, Xiangru Huo, Yuwen Zhang, Zixiang Yan, Qianfeng Wang, Bo Wen
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS
(2020)
Article
Oncology
Dandan Zhao, Jing Wu, Yinjuan Zhao, Wei Shao, Qi Cheng, Xiaoyan Shao, Xianwen Yuan, Juan Ye, Jianpu Gao, Meiling Jin, Chaojun Li, Xiaolin Chen, Yue Zhao, Bin Xue
CANCER CELL INTERNATIONAL
(2020)
Review
Biochemistry & Molecular Biology
Zhao Yue, Wu Tian-Yu, Zhao Meng-Fei, Li Chao-Jun
JOURNAL OF BIOLOGICAL CHEMISTRY
(2020)
Article
Biochemical Research Methods
Jingzi Zhang, Neng Tang, Yinjuan Zhao, Ruoyu Zhao, Xiao Fu, Dandan Zhao, Yue Zhao, Lan Huang, Chaojun Li, Yudong Qin, Bin Xue, Lei Fang
JOURNAL OF PROTEOME RESEARCH
(2020)
Article
Biochemical Research Methods
Jingzi Zhang, Ruoyu Zhao, Clinton Yu, Christine L. N. Bryant, Kenneth Wu, Zhihong Liu, Yibing Ding, Yue Zhao, Bin Xue, Zhen-Qiang Pan, Chaojun Li, Lan Huang, Lei Fang
JOURNAL OF PROTEOME RESEARCH
(2020)
Article
Biochemistry & Molecular Biology
Minzhe Zhu, Qianfeng Wang, Pengxiang Tian, Lu Cheng, Zihao Sun, Qin Hong, Pin Lv, Luzhang Ji, Yang Liu, Qi-Qun Tang, Bo Wen
Summary: This study reveals the impact of early embryo-specific lncRNA lncenc1 on glucose and lipid balance in adult mice, with its deficiency leading to a preference for lipid utilization and glucose intolerance. Interestingly, lncenc1-deficient mice on a high-fat diet showed improved health and resistance to food-induced obesity and metabolic disturbances. Additionally, the study suggests that metabolic defects associated with lncenc1 deficiency may already exist in embryos, supporting the concept of fetal origin of adult metabolic disorders.
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE
(2021)
Letter
Cell Biology
Hui Ming, Qianfeng Wang, Yuwen Zhang, Luzhang Ji, Lu Cheng, Xiangru Huo, Zixiang Yan, Zhexiao Liu, Yongjun Dang, Bo Wen
Article
Biochemistry & Molecular Biology
Kai Li, Jiayue Xu, Yanyun Luo, Dingfeng Zou, Ruiqin Han, Shunshun Zhong, Qing Zhao, Xinyu Mang, Mengzhen Li, Yanmin Si, Yan Lu, Pengyu Li, Cheng Jin, Zhipeng Wang, Fang Wang, Shiying Miao, Bo Wen, Linfang Wang, Yanni Ma, Jia Yu, Wei Song
Summary: This study delineated the global lncRNA expression landscape in mouse spermatogenesis and identified 968 germ cell signature lncRNAs. Functional screening revealed three lncRNAs (Gm4665, 1700027A15Rik, and 1700052122Rik) that directly influence spermatogenesis, with Gm4665 found to occupy the genomic regulatory region of important spermatogenic genes.
Article
Cell Biology
Yong-Juan Sang, Qiang Wang, Feng Zheng, Yue Hua, Xin-Ying Wang, Jing-Zi Zhang, Kang Li, Hai-Quan Wang, Yue Zhao, Min-Sheng Zhu, Hai-Xiang Sun, Chao-Jun Li
Summary: The study found that deficiency of Ggps1 in myometrial cells can cause impaired uterine contractions, disrupting embryonic placing and leading to dystocia. The MVA pathway plays a crucial role in pregnancy and delivery by regulating RhoA prenylation to activate relevant pathways for successful parturition.
JOURNAL OF MOLECULAR CELL BIOLOGY
(2021)
Article
Biochemistry & Molecular Biology
Danyang Chong, Zhong Chen, Shan Guan, Tongyu Zhang, Na Xu, Yue Zhao, Chaojun Li
Summary: The research reveals that GGPP plays an indispensable role in embryonic vascular development by regulating endothelial cell proliferation and antiapoptosis processes. GGPP depletion can counteract the harmful effects of simvastatin on vascular development, and this can be ameliorated by GGOH in developing mouse fetuses.
JOURNAL OF GENETICS AND GENOMICS
(2021)
Article
Biochemical Research Methods
Ruoyu Zhao, Binghao Wang, Yan Guo, Jingzi Zhang, Danqi Chen, Wei Ming He, Yong Juan Zhao, Yibing Ding, Chunyuan Jin, Chaojun Li, Yue Zhao, Wei Ren, Lei Fang
Summary: Arsenic pollution has a significant impact on health, particularly in relation to the interaction between SLBP and chaperone complexes like HSPs and ERp44. Knockdown of these proteins can reduce the protein levels of SLBP and inhibit cell migration induced by arsenic exposure.
Article
Oncology
Qin Hong, Bing Li, Xiumei Cai, Zhengtao Lv, Shilun Cai, Yunshi Zhong, Bo Wen
Summary: The relationship between the transcriptome characteristics and the adenoma-carcinoma sequence in colorectal cancer (CRC) is explored through RNAseq data analysis. Metabolic dysregulation, immune response downregulation, and activation of canonical cancer pathways are identified as key features in CRC formation. TPD52L1 gene is highlighted as a potential marker for tumor formation and poor prognosis in CRC patients.
FRONTIERS IN ONCOLOGY
(2021)
Article
Multidisciplinary Sciences
Jing Wu, Dandan Bu, Haiquan Wang, Di Shen, Danyang Chong, Tongyu Zhang, Weiwei Tao, Mengfei Zhao, Yue Zhao, Lei Fang, Peng Li, Bin Xue, Chao-Jun Li
Summary: The liver lipid metabolism of older individuals can become impaired and the circadian rhythm of genes involved in lipid metabolism is also disturbed. The transcription factor Egr-1 expression in the liver is shifted forward with age in male mice. Deletion of Egr-1 results in increased liver fat accumulation and disruption of rhythmic coupling of Egr-1 and Cidea at the transcriptional level.
NATURE COMMUNICATIONS
(2023)
Article
Genetics & Heredity
Zixiang Yan, Luzhang Ji, Xiangru Huo, Qianfeng Wang, Yuwen Zhang, Bo Wen
GENOMICS PROTEOMICS & BIOINFORMATICS
(2020)