Integrating Phosphoproteome and Transcriptome Reveals New Determinants of Macrophage Multinucleation

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

DC-STAMP, the Key Fusion-Mediating Molecule in Osteoclastogenesis

(2014) Chengcheng Zhang et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Small cell carcinoma of the ovary, hypercalcemic type, displays frequent inactivating germline and somatic mutations in SMARCA4

(2014) Pilar Ramos et al.   NATURE GENETICS

Germline and somatic SMARCA4 mutations characterize small cell carcinoma of the ovary, hypercalcemic type

(2014) Leora Witkowski et al.   NATURE GENETICS

Recurrent SMARCA4 mutations in small cell carcinoma of the ovary

(2014) Petar Jelinic et al.   NATURE GENETICS

Kcnn4 Is a Regulator of Macrophage Multinucleation in Bone Homeostasis and Inflammatory Disease

(2014) Heeseog Kang et al.   Cell Reports

The Warburg effect then and now: From cancer to inflammatory diseases

(2013) Eva M. Palsson-McDermott et al.   BIOESSAYS

HIF-1 mediates metabolic responses to intratumoral hypoxia and oncogenic mutations

(2013) Gregg L. Semenza   JOURNAL OF CLINICAL INVESTIGATION

HIF1  is required for osteoclast activation by estrogen deficiency in postmenopausal osteoporosis

(2013) Y. Miyauchi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A single source k-shortest paths algorithm to infer regulatory pathways in a gene network

(2012) Yu-Keng Shih et al.   BIOINFORMATICS

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

(2012) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Akt Induces Osteoclast Differentiation through Regulating the GSK3 /NFATc1 Signaling Cascade

(2011) J. B. Moon et al.   JOURNAL OF IMMUNOLOGY

Characterization of a TiO2 enrichment method for label-free quantitative phosphoproteomics

(2011) Alex Montoya et al.   METHODS

Genetic Loci Modulate Macrophage Activity and Glomerular Damage in Experimental Glomerulonephritis

(2010) J. Behmoaras et al.   JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY

Confident Phosphorylation Site Localization Using the Mascot Delta Score

(2010) Mikhail M. Savitski et al.   MOLECULAR & CELLULAR PROTEOMICS

TREM2- and DAP12-Dependent Activation of PI3K Requires DAP10 and Is Inhibited by SHIP1

(2010) Q. Peng et al.   Science Signaling

A statistical framework for protein quantitation in bottom-up MS-based proteomics

(2009) Yuliya Karpievitch et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Phosphatidylinositol 3 Kinase/Akt Signal Relay Cooperates with Smad in Bone Morphogenetic Protein-2-Induced Colony Stimulating Factor-1 (CSF-1) Expression and Osteoclast Differentiation

(2009) Chandi C. Mandal et al.   ENDOCRINOLOGY

Modulation of TLR Signaling by Multiple MyD88-Interacting Partners Including Leucine-Rich Repeat Fli-I-Interacting Proteins

(2009) P. Dai et al.   JOURNAL OF IMMUNOLOGY

Macrophage fusion, giant cell formation, and the foreign body response require matrix metalloproteinase 9

(2009) S. MacLauchlan et al.   JOURNAL OF LEUKOCYTE BIOLOGY

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Molecular mediators of macrophage fusion

(2009) Laura Helming et al.   TRENDS IN CELL BIOLOGY

PASTAA: identifying transcription factors associated with sets of co-regulated genes

(2008) Helge G. Roider et al.   BIOINFORMATICS

Giant cell formation in sarcoidosis: cell fusion or proliferation with non-division?

(2008) T. C. M. Th. van Maarsseveen et al.   CLINICAL AND EXPERIMENTAL IMMUNOLOGY

Giant cell formation and function

(2008) William G Brodbeck et al.   CURRENT OPINION IN HEMATOLOGY

JNK/c-Jun Signaling Mediates an Anti-Apoptotic Effect of RANKL in Osteoclasts

(2008) Fumiyo Ikeda et al.   JOURNAL OF BONE AND MINERAL RESEARCH

Jund is a determinant of macrophage activation and is associated with glomerulonephritis susceptibility

(2008) Jacques Behmoaras et al.   NATURE GENETICS