Host range diversification within the IncP-1 plasmid group

The role of the natural environment in the emergence of antibiotic resistance in Gram-negative bacteria

(2013) Elizabeth MH Wellington et al.   LANCET INFECTIOUS DISEASES

Roles of Long and Short Replication Initiation Proteins in the Fate of IncP-1 Plasmids

(2012) H. Yano et al.   JOURNAL OF BACTERIOLOGY

Inferring the Evolutionary History of IncP-1 Plasmids Despite Incongruence among Backbone Gene Trees

(2012) Diya Sen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Expansion of the IncX plasmid family for improved identification and typing of novel plasmids in drug-resistant Enterobacteriaceae

(2012) Timothy J. Johnson et al.   PLASMID

IncP-1ε Plasmids are Important Vectors of Antibiotic Resistance Genes in Agricultural Systems: Diversification Driven by Class 1 Integron Gene Cassettes

(2012) Holger Heuer et al.   Frontiers in Microbiology

Phylogeny of Replication Initiator Protein TrfA Reveals a Highly Divergent Clade of Incompatibility Group P1 Plasmids

(2011) Drake C. Stenger et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genomic organization and genomic structural rearrangements of Sphingobium japonicum UT26, an archetypal γ-hexachlorocyclohexane-degrading bacterium

(2011) Yuji Nagata et al.   ENZYME AND MICROBIAL TECHNOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

The genome sequence of the incompatibility group Iγ plasmid R621a: Evolution of IncI plasmids

(2011) Hiroyuki Takahashi et al.   PLASMID

Diversity, biology and evolution of IncQ-family plasmids

(2011) Wesley Loftie-Eaton et al.   PLASMID

The IncP-1 plasmid backbone adapts to different host bacterial species and evolves through homologous recombination

(2011) Peter Norberg et al.   Nature Communications

Functional Characterization of Replication and Stability Factors of an Incompatibility Group P-1 Plasmid from Xylella fastidiosa

(2010) M. W. Lee et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Mangrove microniches determine the structural and functional diversity of enriched petroleum hydrocarbon-degrading consortia

(2010) Newton C.M. Gomes et al.   FEMS MICROBIOLOGY ECOLOGY

Shifts in the host range of a promiscuous plasmid through parallel evolution of its replication initiation protein

(2010) Masahiro Sota et al.   ISME Journal

Complete Nucleotide Sequence of TOL Plasmid pDK1 Provides Evidence for Evolutionary History of IncP-7 Catabolic Plasmids

(2010) H. Yano et al.   JOURNAL OF BACTERIOLOGY

Predicting Plasmid Promiscuity Based on Genomic Signature

(2010) H. Suzuki et al.   JOURNAL OF BACTERIOLOGY

The Behavior and Significance of Degradative Plasmids Belonging to Inc Groups in Pseudomonas within Natural Environments and Microcosms

(2010) Masaki Shintani et al.   MICROBES AND ENVIRONMENTS

Call of the wild: antibiotic resistance genes in natural environments

(2010) Heather K. Allen et al.   NATURE REVIEWS MICROBIOLOGY

The Complete Multipartite Genome Sequence of Cupriavidus necator JMP134, a Versatile Pollutant Degrader

(2010) Athanasios Lykidis et al.   PLoS One

Comparative Genomics of the IncA/C Multidrug Resistance Plasmid Family

(2009) W. F. Fricke et al.   JOURNAL OF BACTERIOLOGY

All IncP-1 plasmid subgroups, including the novel ε subgroup, are prevalent in the influent of a Danish wastewater treatment plant

(2009) Martin Iain Bahl et al.   PLASMID

Comparative genomics of pAKD4, the prototype IncP-1δ plasmid with a complete backbone

(2009) Diya Sen et al.   PLASMID

GenomeMatcher: A graphical user interface for DNA sequence comparison

(2008) Yoshiyuki Ohtsubo et al.   BMC BIOINFORMATICS

Progress towards understanding the fate of plasmids in bacterial communities

(2008) Frances R. Slater et al.   FEMS MICROBIOLOGY ECOLOGY

Piggery manure used for soil fertilization is a reservoir for transferable antibiotic resistance plasmids

(2008) Chu Thi Thanh Binh et al.   FEMS MICROBIOLOGY ECOLOGY

Diversity of IncP-9 plasmids of Pseudomonas

(2008) Y. R. Sevastsyanovich et al.   MICROBIOLOGY-SGM

Using Mahalanobis distance to compare genomic signatures between bacterial plasmids and chromosomes

(2008) Haruo Suzuki et al.   NUCLEIC ACIDS RESEARCH