Shifts in the Skin-Associated Microbiota of Hatchery-Reared Common Snook Centropomus undecimalis During Acclimation to the Wild

Interpopulation Variation in the Atlantic Salmon Microbiome Reflects Environmental and Genetic Diversity

(2018) Tamsyn M. Uren Webster et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Glucose enhances tilapia against Edwardsiella tarda infection through metabolome reprogramming

(2017) Zhao-hai Zeng et al.   FISH & SHELLFISH IMMUNOLOGY

Fish intestinal microbiome: diversity and symbiosis unravelled by metagenomics

(2017) A.M. Tarnecki et al.   JOURNAL OF APPLIED MICROBIOLOGY

Sodium butyrate improved performance while modulating the cecal microbiota and regulating the expression of intestinal immune-related genes of broiler chickens

(2017) C Bortoluzzi et al.   POULTRY SCIENCE

Fine Flounder (Paralichthys adspersus) Microbiome Showed Important Differences between Wild and Reared Specimens

(2017) Carolina Ramírez et al.   Frontiers in Microbiology

Parasitism perturbs the mucosal microbiome of Atlantic Salmon

(2017) M. S. Llewellyn et al.   Scientific Reports

Microbiota of wild-caught Red Snapper Lutjanus campechanus

(2016) Andrea M. Tarnecki et al.   BMC MICROBIOLOGY

Metagenomic analysis between free-living and cultured Epinephelus fuscoguttatus under different environmental conditions in Indonesian waters

(2016) Philipp Hennersdorf et al.   MARINE POLLUTION BULLETIN

Transition from freshwater to seawater reshapes the skin-associated microbiota of Atlantic salmon

(2016) Jep Lokesh et al.   Scientific Reports

Environment shapes the fecal microbiome of invasive carp species

(2016) Jessica J. Eichmiller et al.   Microbiome

Monitoring and managing microbes in aquaculture - Towards a sustainable industry

(2016) Mikkel Bentzon-Tilia et al.   Microbial Biotechnology

A multiple endpoint analysis of the effects of chronic exposure to sediment contaminated with Deepwater Horizon oil on juvenile Southern flounder and their associated microbiomes

(2015) Nancy J. Brown-Peterson et al.   AQUATIC TOXICOLOGY

Microbial assemblages for environmental quality assessment: Knowledge, gaps and usefulness in the European Marine Strategy Framework Directive

(2015) Gabriella Caruso et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Fructose Restores Susceptibility of Multidrug-Resistant Edwardsiella tarda to Kanamycin

(2015) Yu-bin Su et al.   JOURNAL OF PROTEOME RESEARCH

Community Structure of Skin Microbiome of Gulf Killifish, Fundulus grandis, Is Driven by Seasonality and Not Exposure to Oiled Sediments in a Louisiana Salt Marsh

(2015) Andrea M. Larsen et al.   MICROBIAL ECOLOGY

Community assembly of a euryhaline fish microbiome during salinity acclimation

(2015) Victor T. Schmidt et al.   MOLECULAR ECOLOGY

Gut Microbiota Dynamics during Dietary Shift in Eastern African Cichlid Fishes

(2015) Laura Baldo et al.   PLoS One

Parental contribution and spawning performance in captive common snook Centropomus undecimalis broodstock

(2014) Nicole R. Rhody et al.   AQUACULTURE

Mucosal immunity and probiotics in fish

(2014) Carlo C. Lazado et al.   FISH & SHELLFISH IMMUNOLOGY

Xenophilus arseniciresistens sp. nov., an arsenite-resistant bacterium isolated from soil

(2014) Q.-F. Li et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Diverse sulfate-reducing bacteria of the Desulfosarcina/Desulfococcus clade are the key alkane degraders at marine seeps

(2014) Sara Kleindienst et al.   ISME Journal

Pyrosequencing-based characterization of gastrointestinal bacteria of Atlantic salmon (Salmo salarL.) within a commercial mariculture system

(2014) K.Z. Zarkasi et al.   JOURNAL OF APPLIED MICROBIOLOGY

Inter Individual Variations of the Fish Skin Microbiota: Host Genetics Basis of Mutualism?

(2014) Sébastien Boutin et al.   PLoS One

Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries

(2014) Martin S. Llewellyn et al.   Frontiers in Microbiology

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity of the skin microbiota of fishes: evidence for host species specificity

(2013) Andrea Larsen et al.   FEMS MICROBIOLOGY ECOLOGY

Predominant Bacteria Associated with Red Snapper from the Northern Gulf of Mexico

(2013) Covadonga R. Arias et al.   JOURNAL OF AQUATIC ANIMAL HEALTH

Change in food ingestion induces rapid shifts in the diversity of microbiota associated with cutaneous mucus of Atlantic salmonSalmo salar

(2013) A. Landeira-Dabarca et al.   JOURNAL OF FISH BIOLOGY

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Network Analysis Highlights Complex Interactions between Pathogen, Host and Commensal Microbiota

(2013) Sébastien Boutin et al.   PLoS One

Assessing Reproductive Condition in Captive and Wild Common Snook Stocks: A Comparison between the Wet Mount Technique and Histological Preparations

(2013) N. R. Rhody et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

Characterisation of acute toxicity, genotoxicity and oxidative stress posed by textile effluent on zebrafish

(2012) Wenjuan Zhang et al.   JOURNAL OF ENVIRONMENTAL SCIENCES

Embryonic and Early Larval Development in Hatchery-Reared Common Snook

(2012) Carlos Yanes-Roca et al.   NORTH AMERICAN JOURNAL OF AQUACULTURE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Regulation of immunity and disease resistance by commensal microbes and chromatin modifications during zebrafish development

(2012) J. Galindo-Villegas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Visualising associations between paired ‘omics’ data sets

(2012) Ignacio González et al.   BioData Mining

The minimal genome--a metabolic and environmental comparison

(2011) M. T. DeWall et al.   Briefings in Functional Genomics

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Use of probiotic bacteria in the rearing of Senegalese sole (Solea senegalensis) larvae

(2008) Pavlos Makridis et al.   AQUACULTURE RESEARCH