16S rDNA Pyrosequencing Analysis of Bacterial Community in Heavy Metals Polluted Soils

Selection for Cu-Tolerant Bacterial Communities with Altered Composition, but Unaltered Richness, via Long-Term Cu Exposure

(2012) Jeanette Berg et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity of microorganisms from forest soils differently polluted with heavy metals

(2012) Marcin Chodak et al.   APPLIED SOIL ECOLOGY

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

(2012) Anna Klindworth et al.   NUCLEIC ACIDS RESEARCH

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Exposure of Soil Microbial Communities to Chromium and Arsenic Alters Their Diversity and Structure

(2012) Cody S. Sheik et al.   PLoS One

Effect of Genetically Modified Poplars on Soil Microbial Communities during the Phytoremediation of Waste Mine Tailings

(2011) Moonsuk Hur et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

The Effect of Soil Texture on Richness and Diversity of Bacterial Communities

(2011) Jessica Furrer Chau et al.   ENVIRONMENTAL FORENSICS

Pyrosequencing-Based Assessment of Bacterial Community Structure Along Different Management Types in German Forest and Grassland Soils

(2011) Heiko Nacke et al.   PLoS One

Low Pore Connectivity Increases Bacterial Diversity in Soil

(2010) J. K. Carson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Horizon-Specific Bacterial Community Composition of German Grassland Soils, as Revealed by Pyrosequencing-Based Analysis of 16S rRNA Genes

(2010) C. Will et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Vaginal microbiome of reproductive-age women

(2010) J. Ravel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil

(2010) Stéphane Uroz et al.   Environmental Microbiology Reports

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The Cladistic Basis for the Phylogenetic Diversity (PD) Measure Links Evolutionary Features to Environmental Gradients and Supports Broad Applications of Microbial Ecology’s “Phylogenetic Beta Diversity” Framework

(2009) Daniel Faith et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Plant species influence microbial diversity and carbon allocation in the rhizosphere

(2009) Natalia Ladygina et al.   SOIL BIOLOGY & BIOCHEMISTRY

Distantly sampled soils carry few species in common

(2008) Roberta R Fulthorpe et al.   ISME Journal

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Genetic diversity and phylogenetic relationships of bacteria belonging to the Ochrobactrum–Brucella group by recA and 16S rRNA gene-based comparative sequence analysis

(2008) Holger C. Scholz et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY