A novel stable isotope labelling assisted workflow for improved untargeted LC–HRMS based metabolomics research

New Untargeted Metabolic Profiling Combining Mass Spectrometry and Isotopic Labeling: Application on Aspergillus fumigatus Grown on Wheat

(2013) Patricia M. Cano et al.   ANALYTICAL CHEMISTRY

Combination of Liquid Chromatography–Fourier Transform Ion Cyclotron Resonance-Mass Spectrometry with 13C-Labeling for Chemical Assignment of Sulfur-Containing Metabolites in Onion Bulbs

(2013) Ryo Nakabayashi et al.   ANALYTICAL CHEMISTRY

NTFD--a stand-alone application for the non-targeted detection of stable isotope-labeled compounds in GC/MS data

(2013) K. Hiller et al.   BIOINFORMATICS

Stable isotopic labelling-assisted untargeted metabolic profiling reveals novel conjugates of the mycotoxin deoxynivalenol in wheat

(2012) Bernhard Kluger et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Comparative Analysis of Sample Preparation Methods To Handle the Complexity of the Blood Fluid Metabolome: When Less Is More

(2012) Sara Tulipani et al.   ANALYTICAL CHEMISTRY

mzMatch–ISO: an R tool for the annotation and relative quantification of isotope-labelled mass spectrometry data

(2012) Achuthanunni Chokkathukalam et al.   BIOINFORMATICS

MetExtract: a new software tool for the automated comprehensive extraction of metabolite-derived LC/MS signals in metabolomics research

(2012) Christoph Bueschl et al.   BIOINFORMATICS

Mass appeal: metabolite identification in mass spectrometry-focused untargeted metabolomics

(2012) Warwick B. Dunn et al.   Metabolomics

A cross-platform toolkit for mass spectrometry and proteomics

(2012) Matthew C Chambers et al.   NATURE BIOTECHNOLOGY

Meta-analysis of untargeted metabolomic data from multiple profiling experiments

(2012) Gary J Patti et al.   Nature Protocols

Metabolomics: the apogee of the omics trilogy

(2012) Gary J. Patti et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Addressing the current bottlenecks of metabolomics: Isotopic Ratio Outlier Analysis™, an isotopic-labeling technique for accurate biochemical profiling

(2012) Felice A de Jong et al.   Bioanalysis

Modern analytical techniques in metabolomics analysis

(2011) Aihua Zhang et al.   ANALYST

Liquid chromatography–mass spectrometry based global metabolite profiling: A review

(2011) Georgios A. Theodoridis et al.   ANALYTICA CHIMICA ACTA

Exploring Matrix Effects and Quantification Performance in Metabolomics Experiments Using Artificial Biological Gradients

(2011) Henning Redestig et al.   ANALYTICAL CHEMISTRY

CAMERA: An Integrated Strategy for Compound Spectra Extraction and Annotation of Liquid Chromatography/Mass Spectrometry Data Sets

(2011) Carsten Kuhl et al.   ANALYTICAL CHEMISTRY

Algorithms and tools for the preprocessing of LC–MS metabolomics data

(2011) Sandra Castillo et al.   CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS

Elucidation of Cellular Metabolism Via Metabolomics and Stable-Isotope Assisted Metabolomics

(2011) Karsten Hiller et al.   CURRENT PHARMACEUTICAL BIOTECHNOLOGY

Characteristics and origins of common chemical noise ions in negative ESI LC-MS

(2011) Martin Trötzmüller et al.   JOURNAL OF MASS SPECTROMETRY

MetAlign 3.0: performance enhancement by efficient use of advances in computer hardware

(2011) Arjen Lommen et al.   Metabolomics

LC-MS-based metabolomics

(2011) Bin Zhou et al.   Molecular BioSystems

Nontargeted Elucidation of Metabolic Pathways Using Stable-Isotope Tracers and Mass Spectrometry

(2010) Karsten Hiller et al.   ANALYTICAL CHEMISTRY

Uniform stable-isotope labeling in mammalian cells: formulation of a cost-effective culture medium

(2010) Tatiana A. Egorova-Zachernyuk et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data

(2010) Tomáš Pluskal et al.   BMC BIOINFORMATICS

Plant metabolomics--meeting the analytical challenges of comprehensive metabolite analysis

(2010) A. D. Hegeman   Briefings in Functional Genomics

Pitfalls Associated with the Use of Liquid Chromatography-Tandem Mass Spectrometry in the Clinical Laboratory

(2010) M. Vogeser et al.   CLINICAL CHEMISTRY

Challenges in Mass Spectrometry Based Targeted Metabolomics

(2010) T. Koal et al.   CURRENT MOLECULAR MEDICINE

Mass spectrometry tools and metabolite-specific databases for molecular identification in metabolomics

(2009) M. Brown et al.   ANALYST

13C Isotope-Labeled Metabolomes Allowing for Improved Compound Annotation and Relative Quantification in Liquid Chromatography-Mass Spectrometry-based Metabolomic Research

(2009) Patrick Giavalisco et al.   ANALYTICAL CHEMISTRY

TOPPView: An Open-Source Viewer for Mass Spectrometry Data

(2009) Marc Sturm et al.   JOURNAL OF PROTEOME RESEARCH

Atmospheric pressure ion sources

(2009) Thomas R. Covey et al.   MASS SPECTROMETRY REVIEWS

Mass-spectrometry-based metabolomics: limitations and recommendations for future progress with particular focus on nutrition research

(2009) Augustin Scalbert et al.   Metabolomics

Interferences and contaminants encountered in modern mass spectrometry

(2008) Bernd O. Keller et al.   ANALYTICA CHIMICA ACTA

High-Resolution Direct Infusion-Based Mass Spectrometry in Combination with Whole13C Metabolome Isotope Labeling Allows Unambiguous Assignment of Chemical Sum Formulas

(2008) Patrick Giavalisco et al.   ANALYTICAL CHEMISTRY

Highly sensitive feature detection for high resolution LC/MS

(2008) Ralf Tautenhahn et al.   BMC BIOINFORMATICS

Absolute quantitation of intracellular metabolite concentrations by an isotope ratio-based approach

(2008) Bryson D Bennett et al.   Nature Protocols