COVAIN: a toolbox for uni- and multivariate statistics, time-series and correlation network analysis and inverse estimation of the differential Jacobian from metabolomics covariance data

Unpredictability of metabolism—the key role of metabolomics science in combination with next-generation genome sequencing

(2011) Wolfram Weckwerth   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Parameter estimation of kinetic models from metabolic profiles: two-phase dynamic decoupling method

(2011) Gengjie Jia et al.   BIOINFORMATICS

The complexity of gene expression dynamics revealed by permutation entropy

(2011) Xiaoliang Sun et al.   BMC BIOINFORMATICS

Metabolomic correlation-network modules in Arabidopsis based on a graph-clustering approach

(2011) Atsushi Fukushima et al.   BMC Systems Biology

Cytoscape 2.8: new features for data integration and network visualization

(2010) M. E. Smoot et al.   BIOINFORMATICS

Targeted proteomics for Chlamydomonas reinhardtii combined with rapid subcellular protein fractionation, metabolomics and metabolic flux analyses

(2010) Stefanie Wienkoop et al.   Molecular BioSystems

Reverse engineering of metabolic networks, a critical assessment

(2010) Diana M. Hendrickx et al.   Molecular BioSystems

Metabolic Pathway Relationships Revealed by an Integrative Analysis of the Transcriptional and Metabolic Temperature Stress-Response Dynamics in Yeast

(2010) Dirk Walther et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

AraGEM, a Genome-Scale Reconstruction of the Primary Metabolic Network in Arabidopsis

(2010) C. G. de Oliveira Dal'Molin et al.   PLANT PHYSIOLOGY

Correlation exploration of metabolic and genomic diversity in rice

(2009) Keiichi Mochida et al.   BMC GENOMICS

Dynamic metabolomic data analysis: a tutorial review

(2009) A. K. Smilde et al.   Metabolomics

Multivariate paired data analysis: multilevel PLSDA versus OPLSDA

(2009) Johan A. Westerhuis et al.   Metabolomics

Integration of Metabolomic and Proteomic Phenotypes

(2008) Stefanie Wienkoop et al.   MOLECULAR & CELLULAR PROTEOMICS