4.1 Article

Expressed sequence tags from heat-shocked seagrass Zostera noltii (Hornemann) from its southern distribution range

期刊

MARINE GENOMICS
卷 4, 期 3, 页码 181-188

出版社

ELSEVIER
DOI: 10.1016/j.margen.2011.04.003

关键词

EST library; High temperature stress; Abiotic stress response; Climate change

资金

  1. Portuguese Science Foundation FCT [POCI/MAR/60179/2004]
  2. FEDER
  3. Marine Genomics Network of Excellence [MGE GOCE-CT-2003-505446]
  4. FCT
  5. ESF
  6. Fundação para a Ciência e a Tecnologia [POCI/MAR/60179/2004] Funding Source: FCT

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Predicted global climate change threatens the distributional ranges of species worldwide. We identified genes expressed in the intertidal seagrass Zostera midi during recovery from a simulated low tide heat-shock exposure. Five Expressed Sequence Tag (EST) libraries were compared, corresponding to four recovery times following sub-lethal temperature stress, and a non-stressed control. We sequenced and analyzed 7009 sequence reads from 30 min, 2 h, 4 h and 24 h after the beginning of the heat-shock (AHS), and 1585 from the control library, for a total of 8594 sequence reads. Among 51 Tentative UniGenes (TUGs) exhibiting significantly different expression between libraries, 19 (37.3%) were identified as 'molecular chaperones' and were over-expressed following heat-shock, while 12 (23.5%) were 'photosynthesis TUGs' generally under-expressed in heat-shocked plants. A time course analysis of expression showed a rapid increase in expression of the molecular chaperone class, most of which were heat-shock proteins; which increased from 2 sequence reads in the control library to almost 230 in the 30 min AHS library, followed by a slow decrease during further recovery. In contrast, 'photosynthesis TUGs' were under-expressed 30 min AHS compared with the control library, and declined progressively with recovery time in the stress libraries, with a total of 29 sequence reads 24 h AHS, compared with 125 in the control. A total of 4734 TUGs were screened for EST-Single Sequence Repeats (EST-SSRs) and 86 microsatellites were identified. (C) 2011 Elsevier B.V. All rights reserved.

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