Article
Astronomy & Astrophysics
Julie Gevorgian, David T. Sandwell, Yao Yu, Seung-Sep Kim, Paul Wessel
Summary: Seamounts are isolated highlands in the seafloor with specific characteristics. The global distribution of seamounts can be mapped using the vertical gravity gradient (VGG) derived from satellite measurements. By updating and refining the global seamount catalog using the latest VGG grid, 19,325 new seamounts were identified. The use of an Empirical Orthogonal Function (EOF) analysis revealed a linear relationship between the base radius and height of small seamounts, allowing for accurate height estimation using VGG.
EARTH AND SPACE SCIENCE
(2023)
Article
Ecology
Flavia Montano-Centellas, Bette A. Loiselle, Christy McCain
Summary: The study found that tropical high elevations exhibit higher species diversity, with richness component being more important, while temperate mountains show a greater importance of replacement component, indicating different patterns of functional diversity.
JOURNAL OF BIOGEOGRAPHY
(2021)
Article
Environmental Sciences
Chunyan Qin, Yifei Ge, Jin Gao, Shengli Zhou, Jian Yu, Beixin Wang, Thibault Datry
Summary: Identifying ecological drivers and understanding their effects on metacommunity and beta diversity are crucial for bioassessment and river management. This study explored the impacts of anthropogenic influences on macroinvertebrate communities in the Yangtze River Delta, China, and found that both species sorting and dispersal shaped the communities, with their importance varying with the levels of anthropogenic impacts. Environmental variables and spatial processes should be considered for effective ecosystem management.
SCIENCE OF THE TOTAL ENVIRONMENT
(2022)
Article
Ecology
Nicole A. Stewart, Tiffany A. Schriever
Summary: Understanding the role of environmental filtering and spatial processes in assembling and maintaining rare aquatic communities is crucial for conservation. This study examined the influence of environmental and spatial factors on the diversity of aquatic macroinvertebrate assemblages in wetlands along the coastline of Lake Michigan. The results showed that species diversity and composition varied along the coastline due to environmental gradients, with high species replacement and correlation with local and regional environmental variables. The study emphasized the importance of considering coastline connectivity for maintaining freshwater biodiversity.
FRESHWATER BIOLOGY
(2023)
Article
Ecology
Yihao Ge, Jorge Garcia-Giron, Jani Heino, Zhenyuan Liu, Chen Zhang, Yunzhi Yan, Zhicai Xie, Zhengfei Li
Summary: This study investigates the phylogenetic distance decay patterns of aquatic insect assemblages in dendritic stream networks and finds that dispersal syndromes related to body size, adult flying ability, and voltinism play a key role in distance decay.
JOURNAL OF BIOGEOGRAPHY
(2023)
Article
Chemistry, Analytical
Pengpeng Liu, Shuanggen Jin, Ziyin Wu
Summary: This paper investigates the influence of different resolution data on the inversion topography in the Emperor Seamount Chain by combining ship water depth data and satellite gravity anomaly data. The results show that increasing the resolution improves the accuracy of the inversion terrain model, and sparse areas can effectively reduce the terrain standard deviation.
Article
Biodiversity Conservation
Ramiro Martin-Devasa, Sara Martinez-Santalla, Carola Gomez-Rodriguez, Rosa M. Crujeiras, Andres Baselga
Summary: This study aimed to assess the dependence between the form of the decrease in biological similarity with distance (distance-decay) and species range size, and introduced the use of a sigmoidal model, the Gompertz function, for fitting distance-decay models. The results showed that the functional form of distance-decay patterns depends on species range size, and the Gompertz function accommodates different frequency distributions of species range size.
DIVERSITY AND DISTRIBUTIONS
(2022)
Article
Environmental Sciences
Pengfei Gao, Peng Wang, Mingjun Ding, Hua Zhang, Gaoxiang Huang, Minghua Nie, Guangwei Wang
Summary: The composition of bacterial communities in Chinese lakes significantly varies among different climatic regions and lake habitats. Geographical factors play a dominant role in shaping the distribution of water and sediment bacterial communities, while temperature has a stronger association with water bacterial communities in different climatic regions.
ENVIRONMENTAL RESEARCH
(2023)
Article
Ecology
Tzu-Hsuan Tu, Li-Ling Chen, Yi-Ping Chiu, Li-Hung Lin, Li-Wei Wu, Francesco Italiano, J. Bruce H. Shyu, Seyed Naser Raisossadat, Pei-Ling Wang
Summary: This study examines the diversity and composition of microbial communities in terrestrial mud volcanoes (MVs) and finds that the variation in microbial communities is influenced by distance and physiochemical factors. The results show that microbial communities differ significantly between MVs, but the differences within MVs are relatively small. Physiochemical parameters explain only a small portion of the community variance, with chloride concentration being the most influential factor. Overall, the distribution of microbial communities in terrestrial MVs is affected by multiple factors.
Article
Ecology
Heraldo L. Vasconcelos, Karen C. Neves, Alan N. Andersen
Summary: In this study, the researchers evaluated the variation of vertical stratification of ant assemblages along a latitudinal climatic gradient in the Brazilian savanna. They found that species richness on the ground increased faster with latitude than in trees. Overall, the results suggest that as the climate becomes hotter and drier, ant assemblages in the savanna may become less diverse on the ground and more homogeneous vertically.
JOURNAL OF BIOGEOGRAPHY
(2023)
Article
Biochemical Research Methods
Susan L. Hoops, Dan Knights
Summary: The study introduces an unsupervised algorithm LMdist to adjust pairwise beta diversity measures for better representation of ecological distances between samples. LMdist projects pairwise distances onto a manifold using a graph structure and adjusts distances at the upper end of the dynamic range, allowing for values beyond the original measure's range. LMdist effectively recovers distances along known gradients and complex manifolds, enabling more powerful statistical tests for gradient effects and revealing orthogonal variation to the gradient.
Article
Ecology
Bjoern Kroger, Geza B. Selmeczy, Peter Casper, Janne Soininen, Judit Padisak
Summary: Climate warming and legacy phosphorus in sediments are counteracting efforts to prevent eutrophication of freshwater lakes and reservoirs. Lake Stechlin in Germany shows that even when external phosphorus sources are blocked, legacy phosphorus from sediments can still drive eutrophication. The study highlights the challenges of managing freshwater ecosystems in the context of climate warming.
FRESHWATER BIOLOGY
(2023)
Article
Ecology
George P. Malanson, Elizabeth R. Pansing, Riccardo Testolin, Sylvain Abdulhak, Ariel Bergamini, Renata Custerevska, Corrado Marceno, Nevena Kuzmanovic, Dordije Milanovic, Eszter Ruprecht, Jozef Sibik, Kiril Vassilev, Wolfgang Willner, Borja Jimenez-Alfaro
Summary: The importance of environmental difference and dispersal limitation in explaining similarity of alpine vegetation at increasing distances between regions has been studied. Climate differences showed a unimodal pattern in explaining beta diversity, while dispersal limitation consistently rose on both substrates. On siliceous substrate, dispersal limitation explained more variation in beta diversity only at longer distances, while it was predominant at all distances on calcareous substrate.
Article
Microbiology
Yushu Shi, Liangliang Zhang, Christine B. Peterson, Kim-Anh Do, Robert R. Jenq
Summary: This study systematically compared beta diversity and clustering methods commonly used in microbiome analysis. The results showed that no single method consistently outperforms others across all datasets. A combined metric of BC and UU was proposed, which demonstrated high performance across all datasets.
Article
Environmental Sciences
Savannah L. Goode, Ashley A. Rowden, David A. Bowden, Malcolm R. Clark, Fabrice Stephenson
Summary: Seamounts are common features of the deep seafloor that host a variety of mega-epibenthic fauna, and also support abundant fish stocks. Bottom trawl fisheries impact non-target benthic species on seamounts, making it important to understand environmental drivers affecting benthic communities for habitat mapping improvements and recovery potential assessments. Fine-scale community dynamics and community patch characteristics vary within and between seamounts, influencing spatial management approaches.
FRONTIERS IN MARINE SCIENCE
(2021)
Article
Geochemistry & Geophysics
David A. Clague, David W. Caress, Brian M. Dreyer, Lonny Lundsten, Jennifer B. Paduan, Ryan A. Portner, Ronald Spelz-Madero, Julie A. Bowles, Paterno R. Castillo, Rigoberto Guardado-France, Morgane Le Saout, Julie F. Martin, Miguel A. Santa Rosa-del Rio, Robert A. Zierenberg
GEOCHEMISTRY GEOPHYSICS GEOSYSTEMS
(2018)
Article
Multidisciplinary Sciences
Craig R. McClain, Clifton Nunnally, Mark C. Benfield
ROYAL SOCIETY OPEN SCIENCE
(2019)
Article
Multidisciplinary Sciences
Craig Robert Mcclain, Clifton Nunnally, River Dixon, Greg W. Rouse, Mark Benfield
Article
Environmental Sciences
Severine Martini, Darrin T. Schultz, Lonny Lundsten, Steven H. D. Haddock
FRONTIERS IN MARINE SCIENCE
(2020)
Editorial Material
Biochemistry & Molecular Biology
Leo Chan Gaskins, Craig R. McClain
Summary: Allowing for invisible name changes is crucial for the dignity of trans researchers, as it prevents their publication record from outing them without consent. A centralized name change request through ORCID iD would streamline the process and alleviate the burden of changing each publication individually.
Article
Ecology
Craig R. McClain
Summary: The study found that rarity is common among deep-sea bivalves in the Atlantic Ocean, with a bimodal pattern of very common and very rare species. The drivers of rarity include taxonomic superfamilies, body size, energy availability, temperature, depth, and latitude, which can predict the geographic range, population size, and habitat specificity of species. These findings have implications for deep-sea conservation efforts, particularly as human threats to the environment increase.
Review
Astronomy & Astrophysics
Craig R. McClain, S. River Bryant, Granger Hanks, Marshall W. Bowles
Summary: The search for extraterrestrial life is based on the study of life persisting in extreme conditions on Earth, and understanding the adaptability of life on Earth suggests that the possibility of extraterrestrial life is greater than previously thought.
Article
Biology
S. River D. Bryant, Craig R. McClain
Summary: Climate change impacts the functional diversity and functional niches of bivalve communities in the deep Atlantic Ocean, particularly in energy-limited communities. Changes in energy availability may lead to the expansion of functional space and vulnerability to shifts in food availability.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
(2022)
Article
Ecology
Craig R. Mcclain, Corie M. Boolukos, S. River D. Bryant, Granger Hanks
Summary: Wood in the deep sea serves as an important food source, creating specialized and diverse communities. The reliance on terrestrial sources means that human impacts on land can affect the biodiversity in the deep oceans.
Article
Ecology
Craig R. Mcclain, S. River D. Bryant, Granger Hanks, Jarrett Byrnes
Summary: This study examines six mechanisms underlying species-energy relationships in an experimental wood fall system. The results show that the more individuals hypothesis is supported, but niche dynamics and competition also play important roles. In addition, not only the total energy but also the accessibility of that energy determine community structure differences.
Article
Biology
S. River D. Bryant, Craig R. McClain
Summary: This study examines the impact of environmental energy on the body-size distribution of deep-sea bivalve communities. It demonstrates that body-size distribution is influenced by multiple energetic constraints. With increasing temperature and decreasing carbon and oxygen availability, invertebrate body size may undergo radical shifts that could impact ecosystem function.
Article
Engineering, Ocean
Kakani Katija, Brian Schlining, Lonny Lundsten, Kevin Barnard, Giovanna Sainz, Oceane Boulais, Benjamin Woodward, Katy Croff Bell
Summary: Ocean-going platforms are generating a vast amount of visual data, which exceeds researchers' abilities to process. Although recent advances in AI allow for fast and sophisticated analysis, the lack of dataset standardization and tools in oceanography has hindered progress. To address this issue, the establishment of FathomNet aims to utilize curated data for efficient and responsible marine stewardship, accelerating the development of automated algorithms for underwater visual data analysis.
MARINE TECHNOLOGY SOCIETY JOURNAL
(2021)
Review
Environmental Sciences
Miquel Canals, Christopher K. Pham, Melanie Bergmann, Lars Gutow, Georg Hanke, Erik van Sebille, Michela Angiolillo, Lene Buhl-Mortensen, Alessando Cau, Christos Ioakeimidis, Ulrike Kammann, Lonny Lundsten, George Papatheodorou, Autun Purser, Anna Sanchez-Vidal, Marcus Schulz, Matteo Vinci, Sanae Chiba, Francois Galgani, Daniel Langenkamper, Tiia Moller, Tim W. Nattkemper, Marta Ruiz, Sanna Suikkanen, Lucy Woodall, Elias Fakiris, Maria Eugenia Molina Jack, Alessandra Giorgetti
Summary: The seafloor, covering 70% of the Earth's surface, is a major sink for marine litter. However, due to its location in the deep sea, it is the least investigated fraction of marine litter. Monitoring frameworks are still being established to address the estimation of seafloor macrolitter.
ENVIRONMENTAL RESEARCH LETTERS
(2021)
Article
Paleontology
Mary McGann, Lonny Lundsten
Article
Environmental Sciences
Magdalena N. Georgieva, Charles K. Paull, Crispin T. S. Little, Mary McGann, Diana Sahy, Daniel Condon, Lonny Lundsten, Jack Pewsey, David W. Caress, Robert C. Vnjenhoek
FRONTIERS IN MARINE SCIENCE
(2019)